Pre_GI: OUP Neighbours

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Query: NC_011979:2641500 Geobacter sp. FRC-32, complete genome

D: 47.2989

Host Lineage: Geobacter daltonii; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: This organism is able to reduce uranium and may be useful for in situ bioremediation of uranium. An iron(III)-reducing bacterium isolated from the uranium-contaminated subsurface of the U.S. Department of Energy NABIR Field Research Center (FRC), Oak Ridge, Tennessee, USA. Several recent studies have verified using cultivation-independent methods that the Geobacteraceae are predominant in subsurface environments where dissimilatory metal reduction is important to the remediation of uranium and other contaminants.

Number of Neighbours: 48

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014216:3003347Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome76.0263 %Subject Query25.4377
NC_015388:2499187Desulfobacca acetoxidans DSM 11109 chromosome, complete genome77.2243 %Subject Query28.3135
NC_015388:2211828*Desulfobacca acetoxidans DSM 11109 chromosome, complete genome77.405 %Subject Query28.35
NC_015388:1913118*Desulfobacca acetoxidans DSM 11109 chromosome, complete genome75.0276 %Subject Query28.7776
NC_012108:4387331*Desulfobacterium autotrophicum HRM2, complete genome76.7188 %Subject Query29.2558
NC_014973:595153*Geobacter sp. M18 chromosome, complete genome75.8058 %Subject Query29.4018
NC_012108:4937000Desulfobacterium autotrophicum HRM2, complete genome75.2175 %Subject Query29.6556
NC_011979:3880488Geobacter sp. FRC-32, complete genome78.5907 %Subject Query31.025
NC_009943:1262000Candidatus Desulfococcus oleovorans Hxd3, complete genome75.0858 %Subject Query31.171
NC_011979:589874Geobacter sp. FRC-32, complete genome76.9026 %Subject Query31.1892
NC_011979:4293859*Geobacter sp. FRC-32, complete genome81.8903 %Subject Query31.8357
NC_011979:3495432Geobacter sp. FRC-32, complete genome82.5613 %Subject Query32.0282
NC_011979:3045952*Geobacter sp. FRC-32, complete genome82.2457 %Subject Query32.1498
NC_011979:1683964Geobacter sp. FRC-32, complete genome78.6581 %Subject Query32.1528
NC_015172:1120000*Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome75.7812 %Subject Query32.3504
NC_013223:2609697*Desulfohalobium retbaense DSM 5692, complete genome77.1507 %Subject Query32.5672
NC_010337:1*Heliobacterium modesticaldum Ice1, complete genome75.6342 %Subject Query32.7204
NC_010814:155834*Geobacter lovleyi SZ, complete genome75.3462 %Subject Query32.8003
NC_010814:190673Geobacter lovleyi SZ, complete genome76.4124 %Subject Query33.2259
NC_007759:512477Syntrophus aciditrophicus SB, complete genome76.5012 %Subject Query33.4195
NC_011830:4187362Desulfitobacterium hafniense DCB-2, complete genome76.2469 %Subject Query33.6081
NC_011979:2892119*Geobacter sp. FRC-32, complete genome78.5202 %Subject Query33.9493
NC_011979:3070110Geobacter sp. FRC-32, complete genome80.527 %Subject Query34.1528
NC_011979:3712845*Geobacter sp. FRC-32, complete genome80.7077 %Subject Query34.2534
NC_015172:1429266*Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome76.6697 %Subject Query34.7595
NC_007759:1419171Syntrophus aciditrophicus SB, complete genome75.5423 %Subject Query34.9631
NC_013223:1349000Desulfohalobium retbaense DSM 5692, complete genome75.72 %Subject Query35.4682
NC_009943:272158Candidatus Desulfococcus oleovorans Hxd3, complete genome76.2439 %Subject Query35.4998
NC_011979:537862Geobacter sp. FRC-32, complete genome78.3149 %Subject Query35.6274
NC_011979:646518Geobacter sp. FRC-32, complete genome79.5098 %Subject Query36.0713
NC_013740:1081454Acidaminococcus fermentans DSM 20731, complete genome76.6268 %Subject Query36.3397
NC_007484:3035068*Nitrosococcus oceani ATCC 19707, complete genome75.095 %Subject Query36.6914
NC_009943:1499111*Candidatus Desulfococcus oleovorans Hxd3, complete genome78.0239 %Subject Query36.8908
NC_009943:305854*Candidatus Desulfococcus oleovorans Hxd3, complete genome76.9792 %Subject ←→ Query37.6177
NC_011146:3426500Geobacter bemidjiensis Bem, complete genome75.0276 %Subject ←→ Query37.6377
NC_011768:3385719*Desulfatibacillum alkenivorans AK-01, complete genome76.0754 %Subject ←→ Query37.6623
NC_009943:1637582*Candidatus Desulfococcus oleovorans Hxd3, complete genome75.3033 %Subject ←→ Query38.8862
NC_013223:1090397Desulfohalobium retbaense DSM 5692, complete genome77.5613 %Subject ←→ Query39.6412
NC_007614:109000Nitrosospira multiformis ATCC 25196 chromosome 1, complete75.095 %Subject ←→ Query40.2654
NC_010814:243384Geobacter lovleyi SZ, complete genome75.5944 %Subject ←→ Query41.4667
NC_013223:724394*Desulfohalobium retbaense DSM 5692, complete genome75.2911 %Subject ←→ Query44.059
NC_011979:3409610Geobacter sp. FRC-32, complete genome75.3707 %Subject ←→ Query45.1669
NC_014973:3452100Geobacter sp. M18 chromosome, complete genome75.9252 %Subject ←→ Query47.1869
NC_008609:251608Pelobacter propionicus DSM 2379, complete genome77.7206 %Subject ←→ Query48.2801
NC_013222:817686*Robiginitalea biformata HTCC2501, complete genome75.0766 %Subject ←→ Query49.7242
NC_008609:1027838Pelobacter propionicus DSM 2379, complete genome76.3909 %Subject ←→ Query49.7644
NC_008609:3119502Pelobacter propionicus DSM 2379, complete genome75.2972 %Subject ←→ Query50.8728
NC_012796:1645856*Desulfovibrio magneticus RS-1, complete genome75.383 %Subject ←→ Query53.6076