Pre_GI: OUP Neighbours

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Query: NC_011883:487187 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

D: 35.1361

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.

Number of Neighbours: 21




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014733:2851984*Methylovorus sp. MP688 chromosome, complete genome76.5012 %Subject ←→ Query26.9182
NC_011883:269497Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,80.5576 %Subject ←→ Query27.517
NC_014733:2095996*Methylovorus sp. MP688 chromosome, complete genome75.8793 %Subject ←→ Query27.7967
NC_011883:1601552*Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,80.0766 %Subject ←→ Query28.0612
NC_008781:3302934Polaromonas naphthalenivorans CJ2, complete genome77.2518 %Subject ←→ Query29.2637
NC_007948:4176579Polaromonas sp. JS666, complete genome75.5239 %Subject ←→ Query29.8474
NC_011206:2549132Acidithiobacillus ferrooxidans ATCC 53993, complete genome77.7083 %Subject ←→ Query30.4333
NC_011883:519308*Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,80.9007 %Subject ←→ Query30.6248
NC_007712:172000Sodalis glossinidius str. 'morsitans', complete genome75.8701 %Subject ←→ Query31.0838
NC_008781:3688965Polaromonas naphthalenivorans CJ2, complete genome75.7261 %Subject ←→ Query31.6517
NC_012559:1497548Laribacter hongkongensis HLHK9, complete genome75.4565 %Subject ←→ Query32.8388
NC_008260:1885969*Alcanivorax borkumensis SK2, complete genome75.4197 %Subject ←→ Query33.0861
NC_011751:4992500Escherichia coli UMN026 chromosome, complete genome75.0919 %Subject ←→ Query35.2302
NC_007712:3382000Sodalis glossinidius str. 'morsitans', complete genome75.2298 %Subject ←→ Query35.7768
NC_014837:3766426Pantoea sp. At-9b chromosome, complete genome76.5196 %Subject ←→ Query36.196
NC_016027:123853Gluconacetobacter xylinus NBRC 3288, complete genome75.3523 %Subject ←→ Query36.2025
NC_015942:1711026*Acidithiobacillus ferrivorans SS3 chromosome, complete genome75.6556 %Subject ←→ Query36.3391
NC_013850:2357608Klebsiella variicola At-22 chromosome, complete genome75.0031 %Subject ←→ Query37.9208
NC_016027:2047954*Gluconacetobacter xylinus NBRC 3288, complete genome75.3248 %Subject ←→ Query41.3036
NC_008781:3365468*Polaromonas naphthalenivorans CJ2, complete genome75.7721 %Subject ←→ Query44.05
NC_010410:3606826Acinetobacter baumannii AYE, complete genome75.0306 %Subject Query53.266