Pre_GI: OUP Neighbours

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Query: NC_011883:2031222 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

D: 30.4275

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.

Number of Neighbours: 19

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_016027:346768Gluconacetobacter xylinus NBRC 3288, complete genome75.4136 %Subject ←→ Query27.1918
NC_010424:697187Candidatus Desulforudis audaxviator MP104C, complete genome75.0827 %Subject ←→ Query29.5704
NC_007519:3527207*Desulfovibrio alaskensis G20 chromosome, complete genome83.0913 %Subject ←→ Query29.9307
NC_010424:448865Candidatus Desulforudis audaxviator MP104C, complete genome75.049 %Subject ←→ Query30.1148
NC_013209:2759160*Acetobacter pasteurianus IFO 3283-01, complete genome75.8824 %Subject ←→ Query31.4187
NC_014836:1052214*Desulfurispirillum indicum S5 chromosome, complete genome75.4596 %Subject ←→ Query32.3453
NC_014836:2325559*Desulfurispirillum indicum S5 chromosome, complete genome80.8119 %Subject ←→ Query32.6261
NC_007519:3240864*Desulfovibrio alaskensis G20 chromosome, complete genome78.1066 %Subject ←→ Query32.733
NC_011883:2826000*Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,79.9295 %Subject ←→ Query32.8011
NC_007519:1244198*Desulfovibrio alaskensis G20 chromosome, complete genome76.0509 %Subject ←→ Query33.9807
NC_014836:1180454*Desulfurispirillum indicum S5 chromosome, complete genome80.6403 %Subject ←→ Query33.9994
NC_007519:64157*Desulfovibrio alaskensis G20 chromosome, complete genome82.7053 %Subject ←→ Query34.0801
NC_016027:3038943*Gluconacetobacter xylinus NBRC 3288, complete genome78.0729 %Subject ←→ Query34.1594
NC_010424:14657*Candidatus Desulforudis audaxviator MP104C, complete genome75.3738 %Subject ←→ Query34.1701
NC_013209:1531366*Acetobacter pasteurianus IFO 3283-01, complete genome76.5196 %Subject ←→ Query35.1866
NC_007519:3391090*Desulfovibrio alaskensis G20 chromosome, complete genome77.0159 %Subject ←→ Query35.5307
NC_011883:303980*Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,75.2451 %Subject ←→ Query35.7038
NC_014960:2371989Anaerolinea thermophila UNI-1, complete genome77.019 %Subject ←→ Query36.7042
NC_007519:791679*Desulfovibrio alaskensis G20 chromosome, complete genome78.4773 %Subject Query43.8793