Pre_GI: OUP Neighbours

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Query: NC_011883:1314624 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

D: 33.1894

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.

Number of Neighbours: 12




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_007519:3391090*Desulfovibrio alaskensis G20 chromosome, complete genome75.8732 %Subject ←→ Query35.5307
NC_007519:3240864*Desulfovibrio alaskensis G20 chromosome, complete genome76.6452 %Subject ←→ Query32.733
NC_007519:2773000Desulfovibrio alaskensis G20 chromosome, complete genome75.7445 %Subject ←→ Query39.1062
NC_007519:1244198*Desulfovibrio alaskensis G20 chromosome, complete genome81.0846 %Subject ←→ Query33.9807
NC_007519:791679*Desulfovibrio alaskensis G20 chromosome, complete genome76.7647 %Subject Query43.8793
NC_011883:303980*Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,79.3107 %Subject ←→ Query35.7038
NC_011883:2826000*Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,75.527 %Subject ←→ Query32.8011
NC_014836:312353*Desulfurispirillum indicum S5 chromosome, complete genome75.9498 %Subject ←→ Query34.7993
NC_010814:903199Geobacter lovleyi SZ, complete genome76.5502 %Subject ←→ Query32.9098
NC_010814:1336943Geobacter lovleyi SZ, complete genome77.1324 %Subject ←→ Query33.5765
NC_016027:229180Gluconacetobacter xylinus NBRC 3288, complete genome75.0337 %Subject ←→ Query34.1474
NC_016027:346768Gluconacetobacter xylinus NBRC 3288, complete genome75.7721 %Subject ←→ Query27.1918