Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_011883:1182000 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

D: 29.7334

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_014366:1814000*Gamma proteobacterium HdN1, complete genomeSubject ←→ Query26.7662
NC_015458:1938860Pusillimonas sp. T7-7 chromosome, complete genomeSubject ←→ Query27.2649
NC_007614:261588Nitrosospira multiformis ATCC 25196 chromosome 1, completeSubject ←→ Query27.3338
NC_002932:296557*Chlorobium tepidum TLS, complete genomeSubject ←→ Query27.8605
NC_011883:1601552*Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Subject ←→ Query28.0612
NC_015458:3390674Pusillimonas sp. T7-7 chromosome, complete genomeSubject ←→ Query28.3408
NC_007614:1662874Nitrosospira multiformis ATCC 25196 chromosome 1, completeSubject ←→ Query28.543
NC_007512:2024880*Pelodictyon luteolum DSM 273, complete genomeSubject ←→ Query28.5849
NC_014148:602864*Planctomyces limnophilus DSM 3776 chromosome, complete genomeSubject ←→ Query29.189
NC_007947:2447635*Methylobacillus flagellatus KT, complete genomeSubject ←→ Query29.2281
NC_007947:621213Methylobacillus flagellatus KT, complete genomeSubject ←→ Query29.3774
NC_008260:2961291Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query29.6024
NC_014355:2775979Candidatus Nitrospira defluvii, complete genomeSubject ←→ Query29.6922
NC_011883:1182000*Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Subject ←→ Query29.7334
NC_017507:43135Marinobacter adhaerens HP15 plasmid pHP-187, complete sequenceSubject ←→ Query29.7635
NC_016785:2215732*Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeSubject ←→ Query29.7757
NC_008260:2442000Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query29.8213
NC_007512:1539095Pelodictyon luteolum DSM 273, complete genomeSubject ←→ Query30
NC_014836:2723060Desulfurispirillum indicum S5 chromosome, complete genomeSubject ←→ Query30.2378
NC_009337:320389Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeSubject ←→ Query30.7393
NC_017506:1996652Marinobacter adhaerens HP15 chromosome, complete genomeSubject ←→ Query30.7545
NC_011027:1427343Chlorobaculum parvum NCIB 8327, complete genomeSubject ←→ Query30.7775
NC_008260:1044440*Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query30.791
NC_008740:1815743Marinobacter aquaeolei VT8, complete genomeSubject ←→ Query30.7946
NC_007498:1666242*Pelobacter carbinolicus DSM 2380, complete genomeSubject ←→ Query30.9764
NC_007498:2618131*Pelobacter carbinolicus DSM 2380, complete genomeSubject ←→ Query31.247
NC_008260:2992813Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query31.3939
NC_007498:1491223*Pelobacter carbinolicus DSM 2380, complete genomeSubject ←→ Query31.6786
NC_009337:89631Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeSubject ←→ Query31.7425
NC_009342:2076979Corynebacterium glutamicum R chromosome, complete genomeSubject ←→ Query31.7577
NC_016782:537412Corynebacterium diphtheriae 241 chromosome, complete genomeSubject ←→ Query31.8093
NC_008260:497855*Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query31.8754
NC_008260:228475*Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query31.9309
NC_009523:5522447Roseiflexus sp. RS-1 chromosome, complete genomeSubject ←→ Query32.458
NC_009337:1448607Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeSubject ←→ Query32.5288
NC_014008:114000Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject ←→ Query32.5754
NC_007512:865500Pelodictyon luteolum DSM 273, complete genomeSubject ←→ Query32.6634
NC_020409:1956485Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeSubject ←→ Query32.6929
NC_011769:3401353Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeSubject ←→ Query32.7214
NC_016783:537717Corynebacterium diphtheriae INCA 402 chromosome, complete genomeSubject ←→ Query32.8703
NC_016782:2088858*Corynebacterium diphtheriae 241 chromosome, complete genomeSubject ←→ Query32.9797
NC_016782:2058967Corynebacterium diphtheriae 241 chromosome, complete genomeSubject ←→ Query33.004
NC_012779:2127542Edwardsiella ictaluri 93-146, complete genomeSubject ←→ Query33.0044
NC_016786:533537Corynebacterium diphtheriae HC01 chromosome, complete genomeSubject ←→ Query33.0049
NC_014008:1463795*Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject ←→ Query33.08
NC_015738:36295*Eggerthella sp. YY7918, complete genomeSubject ←→ Query33.159
NC_008260:2340824*Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query33.1855
NC_014008:669170Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject ←→ Query33.2624
NC_017506:2504746Marinobacter adhaerens HP15 chromosome, complete genomeSubject ←→ Query33.2894
NC_014008:2176633*Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject ←→ Query33.4357
NC_008260:187269Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query33.6056
NC_014148:4037357*Planctomyces limnophilus DSM 3776 chromosome, complete genomeSubject ←→ Query33.615
NC_016786:1751204Corynebacterium diphtheriae HC01 chromosome, complete genomeSubject ←→ Query33.7579
NC_014008:1246642Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject ←→ Query33.7853
NC_002488:1430680Xylella fastidiosa 9a5c, complete genomeSubject ←→ Query33.8065
NC_008751:2988235Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeSubject ←→ Query33.9278
NC_008740:2905990Marinobacter aquaeolei VT8, complete genomeSubject ←→ Query34.0247
NC_016789:2084805*Corynebacterium diphtheriae PW8 chromosome, complete genomeSubject ←→ Query34.0619
NC_014355:2635500Candidatus Nitrospira defluvii, complete genomeSubject ←→ Query34.0877
NC_016788:527351Corynebacterium diphtheriae HC04 chromosome, complete genomeSubject ←→ Query34.1622
NC_014008:1552679*Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject ←→ Query34.225
NC_016800:2127200*Corynebacterium diphtheriae BH8 chromosome, complete genomeSubject ←→ Query34.2879
NC_016786:2059564Corynebacterium diphtheriae HC01 chromosome, complete genomeSubject ←→ Query34.3628
NC_011060:1334836Pelodictyon phaeoclathratiforme BU-1, complete genomeSubject ←→ Query34.4419
NC_007484:1671835Nitrosococcus oceani ATCC 19707, complete genomeSubject ←→ Query34.5452
NC_011060:2637893Pelodictyon phaeoclathratiforme BU-1, complete genomeSubject ←→ Query34.5546
NC_011060:459615Pelodictyon phaeoclathratiforme BU-1, complete genomeSubject ←→ Query34.6364
NC_015942:1824847Acidithiobacillus ferrivorans SS3 chromosome, complete genomeSubject ←→ Query34.7933
NC_016801:1782401Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeSubject ←→ Query34.7936
NC_014836:312353*Desulfurispirillum indicum S5 chromosome, complete genomeSubject ←→ Query34.7993
NC_013421:1744928Pectobacterium wasabiae WPP163, complete genomeSubject ←→ Query34.9077
NC_016787:135677*Corynebacterium diphtheriae HC03 chromosome, complete genomeSubject ←→ Query35.2831
NC_016800:163436*Corynebacterium diphtheriae BH8 chromosome, complete genomeSubject ←→ Query35.4572
NC_015174:5157355Planctomyces brasiliensis DSM 5305 chromosome, complete genomeSubject ←→ Query35.5445
NC_016787:1726978Corynebacterium diphtheriae HC03 chromosome, complete genomeSubject ←→ Query36.3154
NC_016799:731849Corynebacterium diphtheriae 31A chromosome, complete genomeSubject ←→ Query36.5479
NC_015673:709411Corynebacterium resistens DSM 45100 chromosome, complete genomeSubject ←→ Query36.701
NC_002935:2103677Corynebacterium diphtheriae NCTC 13129, complete genomeSubject ←→ Query36.892
NC_014148:3959960Planctomyces limnophilus DSM 3776 chromosome, complete genomeSubject ←→ Query36.9151
NC_013173:8923Desulfomicrobium baculatum DSM 4028, complete genomeSubject ←→ Query36.9488
NC_002935:181902*Corynebacterium diphtheriae NCTC 13129, complete genomeSubject ←→ Query36.9863
NC_018868:1960542Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeSubject ←→ Query37.1133
NC_016789:1805503Corynebacterium diphtheriae PW8 chromosome, complete genomeSubject ←→ Query37.2244
NC_017506:1Marinobacter adhaerens HP15 chromosome, complete genomeSubject ←→ Query37.3118
NC_016788:2115428Corynebacterium diphtheriae HC04 chromosome, complete genomeSubject ←→ Query37.5932
NC_014972:2328228Desulfobulbus propionicus DSM 2032 chromosome, complete genomeSubject ←→ Query37.6789
NC_008260:2142311Alcanivorax borkumensis SK2, complete genomeSubject ←→ Query37.6798
NC_016790:2027332Corynebacterium diphtheriae VA01 chromosome, complete genomeSubject ←→ Query37.804
NC_011059:65414*Prosthecochloris aestuarii DSM 271, complete genomeSubject ←→ Query38.0058
NC_007484:3071329Nitrosococcus oceani ATCC 19707, complete genomeSubject ←→ Query38.1201
NC_014733:1073540*Methylovorus sp. MP688 chromosome, complete genomeSubject ←→ Query38.2434
NC_008740:1484531*Marinobacter aquaeolei VT8, complete genomeSubject ←→ Query38.9626
NC_009337:715500Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeSubject ←→ Query39.5855
NC_008463:2017607*Pseudomonas aeruginosa UCBPP-PA14, complete genomeSubject ←→ Query39.6255
NC_014008:3692349Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject ←→ Query39.6545
NC_014836:497350*Desulfurispirillum indicum S5 chromosome, complete genomeSubject Query39.9817
NC_007498:1148249*Pelobacter carbinolicus DSM 2380, complete genomeSubject Query41.2181
NC_011027:1971580Chlorobaculum parvum NCIB 8327, complete genomeSubject Query41.2828
NC_015410:2144387*Pseudomonas mendocina NK-01 chromosome, complete genomeSubject Query41.6723
NC_008260:1015447Alcanivorax borkumensis SK2, complete genomeSubject Query41.6943
NC_016783:201066Corynebacterium diphtheriae INCA 402 chromosome, complete genomeSubject Query41.8029
NC_013173:3679326Desulfomicrobium baculatum DSM 4028, complete genomeSubject Query42.5287
NC_007498:357484Pelobacter carbinolicus DSM 2380, complete genomeSubject Query43.1192
NC_014008:720470Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject Query43.8358
NC_014008:3500000Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject Query43.9315
NC_014008:354292Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSubject Query44.0053
NC_005085:4335333Chromobacterium violaceum ATCC 12472, complete genomeSubject Query45.045
NC_015424:3112637*Aeromonas veronii B565 chromosome, complete genomeSubject Query46.0215
NC_014532:1579419Halomonas elongata DSM 2581, complete genomeSubject Query47.4096
NC_008570:3220539*Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeSubject Query49.5623
NC_018691:1822731Alcanivorax dieselolei B5 chromosome, complete genomeSubject Query49.9461