Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_011835:733320 Bifidobacterium animalis subsp. lactis AD011 chromosome, complete

D: 30.5748

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Isolated from the fecal sample of a healthy, breast-fed infant. Normal gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_010816:1852406Bifidobacterium longum DJO10A, complete genomeSubject ←→ Query23.1548
NC_019897:2645404Thermobacillus composti KWC4 chromosome, complete genomeSubject ←→ Query25.7904
NC_017218:2119964Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeSubject ←→ Query26.968
NC_019897:700332*Thermobacillus composti KWC4 chromosome, complete genomeSubject ←→ Query27.2513
NC_017219:711431Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeSubject ←→ Query28.3439
NC_017221:1763914Bifidobacterium longum subsp. longum KACC 91563 chromosome,Subject ←→ Query28.5782
NC_014169:1099024Bifidobacterium longum subsp. longum JDM301 chromosome, completeSubject ←→ Query28.8648
NC_014169:2234249*Bifidobacterium longum subsp. longum JDM301 chromosome, completeSubject ←→ Query28.9944
NC_011593:533884Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Subject ←→ Query30.4482
NC_011835:733320Bifidobacterium animalis subsp. lactis AD011 chromosome, completeSubject ←→ Query30.5748
NC_011593:712443Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Subject ←→ Query30.5873
NC_017214:658821Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeSubject ←→ Query30.7526
NC_014169:1784435*Bifidobacterium longum subsp. longum JDM301 chromosome, completeSubject ←→ Query30.8497
NC_017221:1222963Bifidobacterium longum subsp. longum KACC 91563 chromosome,Subject ←→ Query30.8988
NC_009667:1934818Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceSubject ←→ Query31.3936
NC_004307:1108325Bifidobacterium longum NCC2705, complete genomeSubject ←→ Query31.6663
NC_012814:1599241Bifidobacterium animalis subsp. lactis Bl-04, complete genomeSubject ←→ Query32.3379
NC_012815:1603916Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeSubject ←→ Query32.4976
NC_019897:3467618Thermobacillus composti KWC4 chromosome, complete genomeSubject ←→ Query32.5171
NC_014638:1043854*Bifidobacterium bifidum PRL2010 chromosome, complete genomeSubject ←→ Query33.99
NC_017218:31247Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeSubject ←→ Query34.289
NC_011835:23204Bifidobacterium animalis subsp. lactis AD011 chromosome, completeSubject ←→ Query34.5603
NC_017216:1603000Bifidobacterium animalis subsp. lactis BLC1, complete genomeSubject ←→ Query34.8884
NC_016641:4653889Paenibacillus terrae HPL-003 chromosome, complete genomeSubject ←→ Query35.0357
NC_017219:2292040Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeSubject ←→ Query35.1038
NC_017217:23000Bifidobacterium animalis subsp. lactis V9 chromosome, completeSubject ←→ Query35.1899
NC_011593:2288993Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Subject ←→ Query35.225
NC_017214:299637Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeSubject ←→ Query35.2427
NC_017215:1605917Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Subject ←→ Query35.375
NC_017217:1607679Bifidobacterium animalis subsp. lactis V9 chromosome, completeSubject ←→ Query35.3758
NC_017216:22454Bifidobacterium animalis subsp. lactis BLC1, complete genomeSubject ←→ Query35.4268
NC_017215:22616Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Subject ←→ Query35.4429
NC_017218:1655009*Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeSubject ←→ Query36.1255
NC_014656:1829336Bifidobacterium longum subsp. longum BBMN68 chromosome, completeSubject ←→ Query36.8317
NC_017219:1163000Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeSubject ←→ Query36.8449
NC_011593:1163000*Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Subject ←→ Query37.0011
NC_019897:2004050*Thermobacillus composti KWC4 chromosome, complete genomeSubject ←→ Query37.866
NC_017218:178564Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeSubject ←→ Query39.2719
NC_008618:1456000*Bifidobacterium adolescentis ATCC 15703, complete genomeSubject ←→ Query40.571
NC_011593:333488Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Subject Query40.6095
NC_014656:1161188Bifidobacterium longum subsp. longum BBMN68 chromosome, completeSubject Query42.0619
NC_013714:1830959*Bifidobacterium dentium Bd1, complete genomeSubject Query47.5233
NC_013714:2294342Bifidobacterium dentium Bd1, complete genomeSubject Query48.7653