Pre_GI: OUP Neighbours

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Query: NC_011750:4543135 Escherichia coli IAI39 chromosome, complete genome

D: 36.053

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 8

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013282:3962188*Cronobacter turicensis, complete genome78.9032 %Subject ←→ Query34.8164
NC_006511:4119332*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC78.8358 %Subject ←→ Query35.1897
NC_003198:3586000*Salmonella enterica subsp. enterica serovar Typhi str. CT18,80.4228 %Subject ←→ Query35.6335
NC_010473:4256000*Escherichia coli str. K-12 substr. DH10B, complete genome84.1544 %Subject ←→ Query36.1868
NC_000913:4159090*Escherichia coli K12, complete genome84.6324 %Subject ←→ Query36.6397
NC_013508:3387272*Edwardsiella tarda EIB202, complete genome76.7279 %Subject ←→ Query37.0707
CU928160:4248621*Escherichia coli IAI1 chromosome, complete genome89.6936 %Subject ←→ Query38.0654
NC_010468:4455201*Escherichia coli ATCC 8739, complete genome80.7445 %Subject ←→ Query38.0958