Pre_GI: OUP Neighbours

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Query: NC_011745:1055354 Escherichia coli ED1a chromosome, complete genome

D: 30.2164

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 268




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome76.057 %Subject ←→ Query29.1646
NC_014029:3958811Yersinia pestis Z176003 chromosome, complete genome76.8934 %Subject ←→ Query29.6054
NC_003143:4006884Yersinia pestis CO92, complete genome76.8873 %Subject ←→ Query29.6176
NC_017154:3898925Yersinia pestis D106004 chromosome, complete genome76.8934 %Subject ←→ Query29.6936
NC_014500:2616423Dickeya dadantii 3937 chromosome, complete genome79.9847 %Subject ←→ Query29.9702
NC_010694:962383Erwinia tasmaniensis, complete genome75.8058 %Subject ←→ Query30.0928
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome76.201 %Subject ←→ Query30.1556
NC_014500:2525880Dickeya dadantii 3937 chromosome, complete genome79.5649 %Subject ←→ Query30.3147
NC_016863:2721826Salmonella enterica subsp. enterica serovar Typhimurium str. UK-177.0588 %Subject ←→ Query30.7584
NC_013941:5317424Escherichia coli O55:H7 str. CB9615 chromosome, complete genome81.6973 %Subject ←→ Query30.8609
NC_011745:2025725Escherichia coli ED1a chromosome, complete genome91.2224 %Subject ←→ Query31.1649
NC_016612:4823529Klebsiella oxytoca KCTC 1686 chromosome, complete genome75.3952 %Subject ←→ Query31.3367
NC_016810:2719779Salmonella enterica subsp. enterica serovar Typhimurium str76.7555 %Subject ←→ Query31.43
NC_016857:2719779Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7476.4828 %Subject ←→ Query31.43
NC_013971:666730Erwinia amylovora ATCC 49946 chromosome, complete genome75.9681 %Subject ←→ Query31.4537
NC_016856:2773995Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S76.4982 %Subject ←→ Query31.5078
NC_012912:1295653Dickeya zeae Ech1591, complete genome76.3174 %Subject ←→ Query31.554
NC_009832:358291Serratia proteamaculans 568, complete genome76.4798 %Subject ←→ Query31.5844
NC_016822:246715*Shigella sonnei 53G, complete genome76.6023 %Subject ←→ Query31.6959
NC_016818:1963875Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, complete76.2714 %Subject ←→ Query31.9066
NC_008563:3119284Escherichia coli APEC O1, complete genome79.8928 %Subject ←→ Query31.9127
NC_011742:4962008Escherichia coli S88 chromosome, complete genome78.5938 %Subject ←→ Query32.4611
NC_013353:2134556*Escherichia coli O103:H2 str. 12009, complete genome76.5839 %Subject ←→ Query32.8216
NC_016845:2306744Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,77.5123 %Subject ←→ Query32.8773
NC_013892:274297Xenorhabdus bovienii SS-2004 chromosome, complete genome78.9553 %Subject ←→ Query32.8965
NC_015968:2195645Enterobacter asburiae LF7a chromosome, complete genome75.4596 %Subject ←→ Query33.0849
NC_009708:372422Yersinia pseudotuberculosis IP 31758 chromosome, complete genome76.011 %Subject ←→ Query33.1886
NC_013941:1014386Escherichia coli O55:H7 str. CB9615 chromosome, complete genome79.0472 %Subject ←→ Query33.1965
NC_016861:22256Salmonella enterica subsp. enterica serovar Typhimurium str77.8554 %Subject ←→ Query33.2928
NC_011283:942594Klebsiella pneumoniae 342 chromosome, complete genome76.8903 %Subject ←→ Query33.3475
NC_007384:1763375Shigella sonnei Ss046, complete genome77.9902 %Subject ←→ Query33.4012
NC_013592:2160000Dickeya dadantii Ech586, complete genome79.6048 %Subject ←→ Query33.4874
NC_012912:2285778Dickeya zeae Ech1591, complete genome79.7733 %Subject ←→ Query33.4887
NC_016860:2323017*Salmonella enterica subsp. enterica serovar Typhimurium str77.8738 %Subject ←→ Query33.5197
NC_009381:222735Yersinia pestis Pestoides F chromosome, complete genome76.8505 %Subject ←→ Query33.5238
NC_016810:2325190*Salmonella enterica subsp. enterica serovar Typhimurium str77.8217 %Subject ←→ Query33.5449
NC_016857:2325190*Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7477.8217 %Subject ←→ Query33.5449
NC_016856:2379027*Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S77.7635 %Subject ←→ Query33.6556
NC_012912:2174183Dickeya zeae Ech1591, complete genome79.2524 %Subject ←→ Query33.679
NC_016845:3448881*Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,75.2451 %Subject ←→ Query33.8626
NC_004547:3817656Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.5086 %Subject ←→ Query34.15
NC_011353:921500Escherichia coli O157:H7 str. EC4115 chromosome, complete genome77.5031 %Subject ←→ Query34.5194
CU928160:256932Escherichia coli IAI1 chromosome, complete genome75.9773 %Subject ←→ Query34.5956
NC_011741:256932Escherichia coli IAI1 chromosome, complete genome75.9773 %Subject ←→ Query34.5956
NC_017265:4265659Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,76.8934 %Subject ←→ Query34.6939
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome82.2855 %Subject ←→ Query34.8158
NC_013364:2522888Escherichia coli O111:H- str. 11128, complete genome83.3425 %Subject ←→ Query34.9313
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome76.2776 %Subject ←→ Query34.9445
NC_015566:316340Serratia sp. AS12 chromosome, complete genome76.4491 %Subject ←→ Query34.9699
NC_017046:2324554*Salmonella enterica subsp. enterica serovar Typhimurium str. 79877.8125 %Subject ←→ Query35.0182
NC_014618:4312295*Enterobacter cloacae SCF1 chromosome, complete genome77.2886 %Subject ←→ Query35.071
NC_013008:918215Escherichia coli O157:H7 str. TW14359 chromosome, complete genome79.0227 %Subject ←→ Query35.1897
NC_011353:2892265Escherichia coli O157:H7 str. EC4115 chromosome, complete genome89.7365 %Subject ←→ Query35.2611
NC_012125:1517925*Salmonella enterica subsp. enterica serovar Paratyphi C strain80.1409 %Subject ←→ Query35.3356
NC_003198:3824187Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.4032 %Subject ←→ Query35.4207
NC_014305:126029Erwinia billingiae Eb661 plasmid pEB170, complete sequence77.8554 %Subject ←→ Query35.5879
NC_014029:331919Yersinia pestis Z176003 chromosome, complete genome78.0944 %Subject ←→ Query35.6572
NC_016831:1865681Salmonella enterica subsp. enterica serovar Gallinarum/pullorum78.4743 %Subject ←→ Query35.6576
NC_016831:687549*Salmonella enterica subsp. enterica serovar Gallinarum/pullorum80.4596 %Subject ←→ Query35.667
NC_006905:3942753Salmonella enterica subsp. enterica serovar Choleraesuis str75.0337 %Subject ←→ Query35.749
NC_011601:756885Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome83.0208 %Subject ←→ Query35.8585
NC_009832:1946401Serratia proteamaculans 568, complete genome81.6146 %Subject ←→ Query35.908
NC_011147:682897*Salmonella enterica subsp. enterica serovar Paratyphi A str76.3634 %Subject ←→ Query35.9573
NC_013364:3312379Escherichia coli O111:H- str. 11128, complete genome84.1146 %Subject ←→ Query36.0044
NC_011094:4442478Salmonella enterica subsp. enterica serovar Schwarzengrund str76.5931 %Subject ←→ Query36.096
NC_013941:2425233Escherichia coli O55:H7 str. CB9615 chromosome, complete genome81.9577 %Subject ←→ Query36.1047
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete80.3554 %Subject ←→ Query36.1113
NC_016832:687000*Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,81.2408 %Subject ←→ Query36.1337
NC_004631:3809678Salmonella enterica subsp. enterica serovar Typhi Ty2, complete76.4859 %Subject ←→ Query36.1376
NC_011601:1077548Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome79.5803 %Subject ←→ Query36.1989
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence75.9589 %Subject ←→ Query36.3239
NC_016845:3238507*Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,77.4357 %Subject ←→ Query36.3698
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.3664 %Subject ←→ Query36.3874
NC_004431:1352906Escherichia coli CFT073, complete genome89.7426 %Subject ←→ Query36.4239
NC_017060:125480Rahnella aquatilis HX2 plasmid PRA1, complete sequence76.1305 %Subject ←→ Query36.427
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome88.5938 %Subject ←→ Query36.4725
NC_016612:5600177Klebsiella oxytoca KCTC 1686 chromosome, complete genome76.3909 %Subject ←→ Query36.4903
NC_012731:3193880*Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome77.5613 %Subject ←→ Query36.6801
NC_009648:3720000*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.9406 %Subject ←→ Query36.7036
NC_013353:1472506Escherichia coli O103:H2 str. 12009, complete genome87.0956 %Subject ←→ Query36.7127
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome87.0956 %Subject ←→ Query36.7127
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome88.9093 %Subject ←→ Query36.813
NC_011094:638552Salmonella enterica subsp. enterica serovar Schwarzengrund str75.8333 %Subject ←→ Query36.8525
NC_009378:106193Yersinia pestis Pestoides F plasmid MT, complete sequence80.9344 %Subject ←→ Query36.8715
NC_011353:1195179*Escherichia coli O157:H7 str. EC4115 chromosome, complete genome91.1244 %Subject ←→ Query36.9832
NC_013941:1963523Escherichia coli O55:H7 str. CB9615 chromosome, complete genome89.8039 %Subject ←→ Query36.9893
NC_011294:2334979Salmonella enterica subsp. enterica serovar Enteritidis str79.5833 %Subject ←→ Query36.9998
NC_016863:2324293*Salmonella enterica subsp. enterica serovar Typhimurium str. UK-176.829 %Subject ←→ Query37.0731
NC_013364:863209Escherichia coli O111:H- str. 11128, complete genome85.2175 %Subject ←→ Query37.1558
NC_003198:2297837Salmonella enterica subsp. enterica serovar Typhi str. CT18,80.1777 %Subject ←→ Query37.159
NC_017168:1631052Yersinia pestis A1122 chromosome, complete genome77.0435 %Subject ←→ Query37.1693
NC_011205:2462025Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185380.0276 %Subject ←→ Query37.1954
NC_013008:2889743Escherichia coli O157:H7 str. TW14359 chromosome, complete genome88.7469 %Subject ←→ Query37.196
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome89.4393 %Subject ←→ Query37.275
NC_011274:2325840Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9180.0827 %Subject ←→ Query37.3546
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,80.0582 %Subject ←→ Query37.4165
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome81.7953 %Subject ←→ Query37.4593
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str80.0092 %Subject ←→ Query37.6094
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome90.4259 %Subject ←→ Query37.6581
NC_013361:2169948Escherichia coli O26:H11 str. 11368 chromosome, complete genome90.6526 %Subject ←→ Query37.7614
NC_016822:1839739Shigella sonnei 53G, complete genome78.4559 %Subject ←→ Query37.9198
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,77.6226 %Subject ←→ Query38.0253
NC_007385:157516Shigella sonnei Ss046 plasmid pSS_046, complete sequence81.8658 %Subject ←→ Query38.0958
NC_013008:1761165Escherichia coli O157:H7 str. TW14359 chromosome, complete genome86.6146 %Subject ←→ Query38.2113
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome78.5815 %Subject ←→ Query38.2235
NC_013361:1896446Escherichia coli O26:H11 str. 11368 chromosome, complete genome87.7665 %Subject ←→ Query38.2296
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome76.0233 %Subject ←→ Query38.2879
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome87.6011 %Subject ←→ Query38.4667
NC_011353:1761977Escherichia coli O157:H7 str. EC4115 chromosome, complete genome87.0221 %Subject ←→ Query38.5032
NC_020260:312805Cronobacter sakazakii Sp291, complete genome76.4706 %Subject ←→ Query38.5624
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome85.0613 %Subject ←→ Query38.6045
NC_011205:329155Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185375.1899 %Subject ←→ Query38.7596
NC_011742:585908Escherichia coli S88 chromosome, complete genome87.2396 %Subject ←→ Query38.828
NC_011750:2009889Escherichia coli IAI39 chromosome, complete genome81.7892 %Subject ←→ Query39.0625
NC_016822:267758Shigella sonnei 53G, complete genome76.6728 %Subject ←→ Query39.2695
NC_015761:3698520Salmonella bongori NCTC 12419, complete genome75.3922 %Subject ←→ Query39.3908
NC_011274:1129686Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9177.8125 %Subject ←→ Query39.5488
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome77.6562 %Subject ←→ Query39.836
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome76.1428 %Subject ←→ Query40.1776
NC_013361:1593543Escherichia coli O26:H11 str. 11368 chromosome, complete genome83.8726 %Subject Query40.2481
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete82.9933 %Subject Query40.59
NC_013592:1424560Dickeya dadantii Ech586, complete genome78.5325 %Subject Query41.2418
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome75.6342 %Subject Query41.4806
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome77.7665 %Subject Query41.5453
NC_016845:1773416Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,80.3094 %Subject Query41.6817
NC_016514:1627664*Enterobacter cloacae EcWSU1 chromosome, complete genome77.6195 %Subject Query41.7029
NC_011283:2103500*Klebsiella pneumoniae 342 chromosome, complete genome76.7402 %Subject Query42.41
NC_015761:2227500Salmonella bongori NCTC 12419, complete genome76.777 %Subject Query42.5785
NC_012731:2302974Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome76.2868 %Subject Query43.1245
NC_016846:24500Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,76.106 %Subject Query43.5812
NC_010660:175200*Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence76.9087 %Subject Query46.3542
NC_011283:1901229*Klebsiella pneumoniae 342 chromosome, complete genome75.5974 %Subject Query49.5744
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.4167 %Subject Query49.6231
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.9099 %Subject Query50.7802