Pre_GI: OUP Neighbours

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Query: NC_011593:1163000 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

D: 37.0011

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.

Number of Neighbours: 10

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_017219:1163000Bifidobacterium longum subsp. infantis ATCC 15697, complete genome98.8051 %Subject ←→ Query36.8449
NC_017221:1763914Bifidobacterium longum subsp. longum KACC 91563 chromosome,79.5282 %Subject ←→ Query28.5782
NC_017219:2292040Bifidobacterium longum subsp. infantis ATCC 15697, complete genome79.0625 %Subject ←→ Query35.1038
NC_011593:2288993Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,78.943 %Subject ←→ Query35.225
NC_011593:533884Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,78.364 %Subject ←→ Query30.4482
NC_004307:1108325Bifidobacterium longum NCC2705, complete genome76.9761 %Subject ←→ Query31.6663
NC_014169:1099024Bifidobacterium longum subsp. longum JDM301 chromosome, complete76.0202 %Subject ←→ Query28.8648
NC_013714:2294342Bifidobacterium dentium Bd1, complete genome75.8946 %Subject Query48.7653
NC_014638:1043854*Bifidobacterium bifidum PRL2010 chromosome, complete genome75.4504 %Subject ←→ Query33.99
NC_019897:700332*Thermobacillus composti KWC4 chromosome, complete genome75.3983 %Subject ←→ Query27.2513