Pre_GI: OUP Neighbours

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Query: NC_010999:561914 Lactobacillus casei, complete genome

D: 30.939

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus casei BL23 is a probiotic strain that was originally isolated from cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

Number of Neighbours: 129

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_002662:1042546Lactococcus lactis subsp. lactis Il1403, complete genome75.6648 %Subject Query18.3822
NC_013656:1071667Lactococcus lactis subsp. lactis KF147, complete genome75.8303 %Subject Query19.1695
NC_016011:678419Listeria ivanovii subsp. ivanovii PAM 55, complete genome75.1777 %Subject Query19.8549
NC_014136:329484Leuconostoc kimchii IMSNU11154 chromosome, complete genome78.2751 %Subject Query20.2253
NC_013861:3341955Legionella longbeachae NSW150, complete genome75.4289 %Subject Query20.4415
NC_015930:821342Lactococcus garvieae ATCC 49156, complete genome76.6759 %Subject Query20.8694
NC_015391:2488450Carnobacterium sp. 17-4 chromosome, complete genome75.5178 %Subject ←→ Query21.1758
NC_005966:159232*Acinetobacter sp. ADP1, complete genome76.9485 %Subject ←→ Query21.8081
NC_009513:870837Lactobacillus reuteri F275, complete genome75.9743 %Subject ←→ Query22.0209
NC_015391:504227Carnobacterium sp. 17-4 chromosome, complete genome77.5429 %Subject ←→ Query22.3067
NC_015428:193817Lactobacillus buchneri NRRL B-30929 chromosome, complete genome77.3928 %Subject ←→ Query22.7687
NC_005966:3334864Acinetobacter sp. ADP1, complete genome76.7647 %Subject ←→ Query22.8133
NC_008527:740060*Lactococcus lactis subsp. cremoris SK11, complete genome76.2898 %Subject ←→ Query22.9383
NC_005966:1832066Acinetobacter sp. ADP1, complete genome75.0582 %Subject ←→ Query22.945
NC_010400:3271722Acinetobacter baumannii, complete genome76.0815 %Subject ←→ Query22.9511
NC_015697:256000*Lactobacillus reuteri SD2112 chromosome, complete genome78.1893 %Subject ←→ Query23.2612
NC_009848:2335265Bacillus pumilus SAFR-032, complete genome77.549 %Subject ←→ Query23.4436
NC_013891:640784*Listeria seeligeri serovar 1/2b str. SLCC3954, complete genome75.0797 %Subject ←→ Query23.8704
NC_014334:1039248Lactobacillus casei str. Zhang chromosome, complete genome79.0502 %Subject ←→ Query24.0151
NC_002663:62500Pasteurella multocida subsp. multocida str. Pm70, complete genome75.386 %Subject ←→ Query24.6055
NC_014319:1613611Leuconostoc gasicomitatum LMG 18811, complete genome77.7298 %Subject ←→ Query24.79
NC_014334:2696000Lactobacillus casei str. Zhang chromosome, complete genome80.3646 %Subject ←→ Query25.2128
NC_009848:3631243Bacillus pumilus SAFR-032, complete genome76.2684 %Subject ←→ Query25.4153
NC_004668:3053119*Enterococcus faecalis V583, complete genome76.1642 %Subject ←→ Query25.4317
NC_014334:2307950Lactobacillus casei str. Zhang chromosome, complete genome78.9277 %Subject ←→ Query25.5593
NC_009004:1770497*Lactococcus lactis subsp. cremoris MG1363, complete genome76.4706 %Subject ←→ Query25.5739
NC_010999:349252Lactobacillus casei, complete genome79.1513 %Subject ←→ Query25.611
NC_015428:1544728*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome77.1415 %Subject ←→ Query25.6452
NC_009848:354202*Bacillus pumilus SAFR-032, complete genome76.6238 %Subject ←→ Query25.7688
NC_010080:1885677Lactobacillus helveticus DPC 4571, complete genome78.2782 %Subject ←→ Query25.9241
NC_010080:1911932Lactobacillus helveticus DPC 4571, complete genome78.8235 %Subject ←→ Query25.9336
NC_014334:369974Lactobacillus casei str. Zhang chromosome, complete genome82.5184 %Subject ←→ Query26.4531
NC_010999:2059738Lactobacillus casei, complete genome79.0104 %Subject ←→ Query26.5655
NC_014724:1101950Lactobacillus amylovorus GRL 1112 chromosome, complete genome80.0306 %Subject ←→ Query26.6698
NC_005966:923008Acinetobacter sp. ADP1, complete genome75.5178 %Subject ←→ Query26.7419
NC_004668:2938000*Enterococcus faecalis V583, complete genome75.3952 %Subject ←→ Query26.7423
NC_015428:1483768Lactobacillus buchneri NRRL B-30929 chromosome, complete genome82.1569 %Subject ←→ Query26.7814
NC_008497:1575884*Lactobacillus brevis ATCC 367, complete genome75.3523 %Subject ←→ Query26.8361
NC_008526:2373190Lactobacillus casei ATCC 334, complete genome78.2445 %Subject ←→ Query26.8543
NC_015731:2811579Nitrosomonas sp. Is79A3 chromosome, complete genome75.5545 %Subject ←→ Query26.9546
NC_013166:194614*Kangiella koreensis DSM 16069, complete genome77.0129 %Subject ←→ Query27.042
NC_010999:2516000Lactobacillus casei, complete genome78.6612 %Subject ←→ Query27.1158
NC_010999:2483000Lactobacillus casei, complete genome78.9798 %Subject ←→ Query27.2718
NC_008526:1973500Lactobacillus casei ATCC 334, complete genome77.7696 %Subject ←→ Query27.286
NC_015731:2400526*Nitrosomonas sp. Is79A3 chromosome, complete genome75.8027 %Subject ←→ Query27.4684
NC_014479:3825195*Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete76.5594 %Subject ←→ Query27.6174
NC_015222:94847Nitrosomonas sp. AL212 chromosome, complete genome76.6085 %Subject ←→ Query27.6612
NC_007520:903799*Thiomicrospira crunogena XCL-2, complete genome75.1685 %Subject ←→ Query27.7177
NC_015222:1749553*Nitrosomonas sp. AL212 chromosome, complete genome75.5882 %Subject ←→ Query27.7237
NC_012984:1027898Lactobacillus plantarum JDM1, complete genome77.932 %Subject ←→ Query27.8362
NC_005140:660305Vibrio vulnificus YJ016 chromosome II, complete sequence78.4069 %Subject ←→ Query27.8453
NC_014976:2867454Bacillus subtilis BSn5 chromosome, complete genome76.3358 %Subject ←→ Query27.8605
NC_015975:789312Lactobacillus ruminis ATCC 27782 chromosome, complete genome77.2518 %Subject ←→ Query27.8749
NC_004116:1827351*Streptococcus agalactiae 2603V/R, complete genome75.8609 %Subject ←→ Query27.9143
NC_009800:320115Escherichia coli HS, complete genome75.9467 %Subject ←→ Query28.201
NC_010999:2450974*Lactobacillus casei, complete genome80.4013 %Subject ←→ Query28.2344
NC_004460:81687Vibrio vulnificus CMCP6 chromosome II, complete sequence78.8205 %Subject ←→ Query28.2861
NC_008497:1111891*Lactobacillus brevis ATCC 367, complete genome76.9577 %Subject ←→ Query28.4188
NC_013199:1150000Lactobacillus rhamnosus Lc 705, complete genome77.5184 %Subject ←→ Query28.4351
NC_014479:1961692Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete76.2806 %Subject ←→ Query28.4781
NC_010404:55908Acinetobacter baumannii plasmid p3ABAYE, complete sequence75.386 %Subject ←→ Query28.66
NC_015731:2460248*Nitrosomonas sp. Is79A3 chromosome, complete genome75.0153 %Subject ←→ Query28.8132
NC_013895:1086500*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.6801 %Subject ←→ Query28.8667
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome78.7653 %Subject ←→ Query28.9383
NC_009052:5089963Shewanella baltica OS155, complete genome76.0968 %Subject ←→ Query29.0126
NC_015222:1607757Nitrosomonas sp. AL212 chromosome, complete genome75.4473 %Subject ←→ Query29.1095
NC_010999:1245239Lactobacillus casei, complete genome81.3971 %Subject ←→ Query29.2811
NC_009783:1956000Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence76.5839 %Subject ←→ Query29.2954
NC_000964:2670288Bacillus subtilis subsp. subtilis str. 168, complete genome75.9099 %Subject ←→ Query29.3065
NC_014334:37040Lactobacillus casei str. Zhang chromosome, complete genome79.4516 %Subject ←→ Query29.347
NC_012984:520000Lactobacillus plantarum JDM1, complete genome77.0527 %Subject ←→ Query29.4929
NC_013199:2426686Lactobacillus rhamnosus Lc 705, complete genome75.2083 %Subject ←→ Query29.5122
NC_005140:883857Vibrio vulnificus YJ016 chromosome II, complete sequence75.0766 %Subject ←→ Query29.5173
NC_013199:1407742*Lactobacillus rhamnosus Lc 705, complete genome78.5325 %Subject ←→ Query29.5477
NC_013199:392450*Lactobacillus rhamnosus Lc 705, complete genome79.2831 %Subject ←→ Query29.6644
NC_010999:623489Lactobacillus casei, complete genome78.5509 %Subject ←→ Query29.8391
NC_013198:2458080Lactobacillus rhamnosus GG, complete genome75.7138 %Subject ←→ Query29.954
NC_008526:506263Lactobacillus casei ATCC 334, complete genome90.5392 %Subject ←→ Query30.2894
NC_015975:752927*Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.4136 %Subject ←→ Query30.478
NC_009513:169146*Lactobacillus reuteri F275, complete genome76.2929 %Subject ←→ Query30.5164
NC_008526:565902Lactobacillus casei ATCC 334, complete genome75.4075 %Subject ←→ Query30.5707
NC_013199:2386924Lactobacillus rhamnosus Lc 705, complete genome77.5031 %Subject ←→ Query30.5957
NC_015602:1339067*Lactobacillus kefiranofaciens ZW3 chromosome, complete genome75.0184 %Subject ←→ Query30.661
NC_013198:1030970*Lactobacillus rhamnosus GG, complete genome77.8738 %Subject ←→ Query30.8386
NC_007576:1564739*Lactobacillus sakei subsp. sakei 23K, complete genome75.3431 %Subject ←→ Query31.0118
NC_015214:1458480Lactobacillus acidophilus 30SC chromosome, complete genome80.0368 %Subject ←→ Query31.0242
NC_013198:394000*Lactobacillus rhamnosus GG, complete genome80.8119 %Subject ←→ Query31.056
NC_008322:2077628*Shewanella sp. MR-7, complete genome76.5472 %Subject ←→ Query31.0943
NC_008529:1133665Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete77.4632 %Subject ←→ Query31.098
NC_015428:1668465*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome75.6036 %Subject ←→ Query31.3716
NC_010999:1381497*Lactobacillus casei, complete genome80.2543 %Subject ←→ Query31.3851
NC_016023:1959255Bacillus coagulans 36D1 chromosome, complete genome75.4473 %Subject ←→ Query31.4721
NC_013198:36829Lactobacillus rhamnosus GG, complete genome77.307 %Subject ←→ Query31.5674
NC_015602:1949610Lactobacillus kefiranofaciens ZW3 chromosome, complete genome77.2028 %Subject ←→ Query31.6209
NC_015731:313676Nitrosomonas sp. Is79A3 chromosome, complete genome76.829 %Subject ←→ Query31.7675
NC_008054:1117703*Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete76.1428 %Subject ←→ Query31.8215
NC_004668:3184319*Enterococcus faecalis V583, complete genome77.5674 %Subject ←→ Query31.8458
NC_010999:2155714Lactobacillus casei, complete genome77.3468 %Subject ←→ Query31.9385
NC_013199:1966334*Lactobacillus rhamnosus Lc 705, complete genome80.046 %Subject ←→ Query31.9404
NC_014727:889132Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,77.6042 %Subject ←→ Query32.2258
NC_013198:1095591Lactobacillus rhamnosus GG, complete genome87.2855 %Subject ←→ Query32.5093
NC_008526:1924761Lactobacillus casei ATCC 334, complete genome85.095 %Subject ←→ Query32.8703
NC_012491:3704000Brevibacillus brevis NBRC 100599, complete genome75.5729 %Subject ←→ Query33.2928
NC_014334:1954333Lactobacillus casei str. Zhang chromosome, complete genome77.3958 %Subject ←→ Query33.3293
NC_009848:775000Bacillus pumilus SAFR-032, complete genome75.3707 %Subject ←→ Query33.412
NC_013198:1538792*Lactobacillus rhamnosus GG, complete genome82.2855 %Subject ←→ Query33.5442
NC_008577:2511326Shewanella sp. ANA-3 chromosome 1, complete sequence75.3983 %Subject ←→ Query33.6393
NC_012691:1250385Tolumonas auensis DSM 9187, complete genome75.5116 %Subject ←→ Query33.6941
NC_013199:2058857*Lactobacillus rhamnosus Lc 705, complete genome77.8799 %Subject ←→ Query33.7873
NC_013199:845000Lactobacillus rhamnosus Lc 705, complete genome86.1366 %Subject ←→ Query33.8589
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome76.8444 %Subject ←→ Query34.0009
NC_002505:1931750Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.0478 %Subject ←→ Query34.0291
NC_013166:82986Kangiella koreensis DSM 16069, complete genome75.4626 %Subject ←→ Query34.1481
NC_006322:3418268Bacillus licheniformis ATCC 14580, complete genome75.6464 %Subject ←→ Query34.2705
NC_008054:201075*Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete77.2917 %Subject ←→ Query34.2781
NC_014727:1220869Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,78.989 %Subject ←→ Query34.3211
NC_015510:644500Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome75.6863 %Subject ←→ Query34.3611
NC_008322:1186000*Shewanella sp. MR-7, complete genome78.076 %Subject ←→ Query34.6086
NC_008577:2402165Shewanella sp. ANA-3 chromosome 1, complete sequence76.1673 %Subject ←→ Query34.8689
NC_013198:2088780*Lactobacillus rhamnosus GG, complete genome77.7972 %Subject ←→ Query35.0489
NC_002505:1892430*Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete77.6317 %Subject ←→ Query35.2857
NC_008529:1042220*Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete77.0129 %Subject ←→ Query35.6044
NC_012691:2097287*Tolumonas auensis DSM 9187, complete genome76.7218 %Subject ←→ Query35.9123
NC_015634:2595500Bacillus coagulans 2-6 chromosome, complete genome76.1305 %Subject ←→ Query35.9909
NC_010610:861194Lactobacillus fermentum IFO 3956, complete genome75.242 %Subject ←→ Query36.7806
NC_014010:1850500Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete76.3205 %Subject ←→ Query36.9283
NC_002488:1775629*Xylella fastidiosa 9a5c, complete genome75.7935 %Subject ←→ Query38.0504
NC_015214:1853106Lactobacillus acidophilus 30SC chromosome, complete genome76.3664 %Subject Query43.7956
NC_010610:795975Lactobacillus fermentum IFO 3956, complete genome76.7279 %Subject Query44.835