Pre_GI: OUP Neighbours

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Query: NC_010999:1979989 Lactobacillus casei, complete genome

D: 36.6636

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus casei BL23 is a probiotic strain that was originally isolated from cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

Number of Neighbours: 54




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015222:2475792*Nitrosomonas sp. AL212 chromosome, complete genome75.337 %Subject ←→ Query26.7854
NC_010999:2516000Lactobacillus casei, complete genome81.5043 %Subject ←→ Query27.1158
NC_015222:523915Nitrosomonas sp. AL212 chromosome, complete genome75.0582 %Subject ←→ Query27.4514
NC_014334:1848340*Lactobacillus casei str. Zhang chromosome, complete genome80.3707 %Subject ←→ Query27.6265
NC_015222:1492500Nitrosomonas sp. AL212 chromosome, complete genome75.579 %Subject ←→ Query27.6569
NC_015731:169989Nitrosomonas sp. Is79A3 chromosome, complete genome76.4737 %Subject ←→ Query27.6873
NC_015222:1749553*Nitrosomonas sp. AL212 chromosome, complete genome75.8425 %Subject ←→ Query27.7237
NC_010999:2450974*Lactobacillus casei, complete genome81.3726 %Subject ←→ Query28.2344
NC_014366:478000*Gamma proteobacterium HdN1, complete genome76.4951 %Subject ←→ Query28.2485
NC_008150:4561633*Yersinia pestis Antiqua, complete genome76.4124 %Subject ←→ Query28.4594
NC_009138:668000Herminiimonas arsenicoxydans, complete genome75.5055 %Subject ←→ Query28.6266
NC_010465:3958766Yersinia pseudotuberculosis YPIII, complete genome75.9957 %Subject ←→ Query28.7816
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome82.4908 %Subject ←→ Query28.9383
NC_010159:2955562Yersinia pestis Angola, complete genome75.4105 %Subject ←→ Query29.0613
NC_015222:1607757Nitrosomonas sp. AL212 chromosome, complete genome75.0582 %Subject ←→ Query29.1095
NC_004088:4116676Yersinia pestis KIM, complete genome76.1949 %Subject ←→ Query29.2173
NC_003143:483395*Yersinia pestis CO92, complete genome76.492 %Subject ←→ Query29.2984
NC_009138:467268Herminiimonas arsenicoxydans, complete genome75.3983 %Subject ←→ Query29.4022
NC_014334:99000*Lactobacillus casei str. Zhang chromosome, complete genome81.6513 %Subject ←→ Query29.7551
NC_005810:4224500Yersinia pestis biovar Microtus str. 91001, complete genome76.7371 %Subject ←→ Query29.8821
NC_008149:402599*Yersinia pestis Nepal516, complete genome76.8842 %Subject ←→ Query30.0082
NC_006155:713174*Yersinia pseudotuberculosis IP 32953, complete genome76.7065 %Subject ←→ Query30.0948
NC_010159:809663Yersinia pestis Angola, complete genome76.5165 %Subject ←→ Query30.5995
NC_013422:991500*Halothiobacillus neapolitanus c2, complete genome76.0907 %Subject ←→ Query30.9399
NC_013198:511795Lactobacillus rhamnosus GG, complete genome77.0098 %Subject ←→ Query31.25
NC_013199:1966334*Lactobacillus rhamnosus Lc 705, complete genome78.704 %Subject ←→ Query31.9404
NC_012917:2971702Pectobacterium carotovorum subsp. carotovorum PC1, complete genome75.5116 %Subject ←→ Query32.0937
NC_014334:589526Lactobacillus casei str. Zhang chromosome, complete genome79.7672 %Subject ←→ Query32.7578
NC_008577:4183361Shewanella sp. ANA-3 chromosome 1, complete sequence76.9301 %Subject ←→ Query32.7699
NC_010999:252605Lactobacillus casei, complete genome85.1562 %Subject ←→ Query32.847
NC_014394:1594071Gallionella capsiferriformans ES-2 chromosome, complete genome75.2788 %Subject ←→ Query33.463
NC_014394:1626699Gallionella capsiferriformans ES-2 chromosome, complete genome76.6575 %Subject ←→ Query33.8875
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome79.1759 %Subject ←→ Query34.0009
NC_014394:2111985*Gallionella capsiferriformans ES-2 chromosome, complete genome75.1899 %Subject ←→ Query34.1906
CU928145:2655989*Escherichia coli 55989 chromosome, complete genome75.7016 %Subject ←→ Query34.5105
NC_011748:2655989*Escherichia coli 55989, complete genome75.7016 %Subject ←→ Query34.5105
NC_008526:250000*Lactobacillus casei ATCC 334, complete genome85.5331 %Subject ←→ Query35.0097
NC_013421:2004088Pectobacterium wasabiae WPP163, complete genome75.1991 %Subject ←→ Query35.1119
NC_014334:267409*Lactobacillus casei str. Zhang chromosome, complete genome86.3511 %Subject ←→ Query35.3356
NC_010554:2646806Proteus mirabilis HI4320, complete genome81.7892 %Subject ←→ Query35.3988
NC_008526:1822000*Lactobacillus casei ATCC 334, complete genome91.7678 %Subject ←→ Query35.8686
NC_010995:4525119Cellvibrio japonicus Ueda107, complete genome75.1042 %Subject ←→ Query36.7553
NC_014334:1775781*Lactobacillus casei str. Zhang chromosome, complete genome95.7782 %Subject ←→ Query36.9239
NC_015572:4916430Methylomonas methanica MC09 chromosome, complete genome77.1783 %Subject ←→ Query37.6362
NC_004547:1970686*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.3002 %Subject ←→ Query38.2099
NC_007384:4095016Shigella sonnei Ss046, complete genome75.9528 %Subject ←→ Query38.9677
NC_014334:769205*Lactobacillus casei str. Zhang chromosome, complete genome84.2708 %Subject ←→ Query39.1896
NC_004547:2810151*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.3401 %Subject ←→ Query40.9248
NC_015567:1660462Serratia sp. AS9 chromosome, complete genome78.1036 %Subject ←→ Query42.6158
NC_015566:1659288Serratia sp. AS12 chromosome, complete genome78.1189 %Subject ←→ Query44.7005
NC_009648:5119271*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.0582 %Subject ←→ Query45.1911
NC_008573:195317Shewanella sp. ANA-3 plasmid 1, complete sequence76.6085 %Subject ←→ Query46.5154
NC_009832:1719149Serratia proteamaculans 568, complete genome75.4442 %Subject Query48.0067
NC_010611:240839Acinetobacter baumannii ACICU, complete genome77.9044 %Subject Query48.2217