Pre_GI: OUP Neighbours

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Query: NC_010803:1436397 Chlorobium limicola DSM 245, complete genome

D: 44.8524

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.

Number of Neighbours: 18

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_006322:2886404*Bacillus licheniformis ATCC 14580, complete genome76.2071 %Subject Query31.3686
NC_013406:2207520*Paenibacillus sp. Y412MC10 chromosome, complete genome75.0184 %Subject Query31.481
NC_013406:3926531Paenibacillus sp. Y412MC10 chromosome, complete genome75.8824 %Subject Query33.6637
NC_013406:4478000Paenibacillus sp. Y412MC10 chromosome, complete genome76.6146 %Subject Query33.8886
NC_015690:1348691*Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.6648 %Subject ←→ Query35.1991
NC_012914:569471Paenibacillus sp. JDR-2, complete genome75.7445 %Subject ←→ Query35.7177
NC_008942:698353Methanocorpusculum labreanum Z, complete genome75.1103 %Subject ←→ Query36.9858
NC_013406:5954472Paenibacillus sp. Y412MC10 chromosome, complete genome75.098 %Subject ←→ Query37.4529
NC_013406:1145268Paenibacillus sp. Y412MC10 chromosome, complete genome75.0337 %Subject ←→ Query38.0715
NC_015690:3438288Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.0521 %Subject ←→ Query39.3226
NC_008639:1573971Chlorobium phaeobacteroides DSM 266, complete genome88.2567 %Subject ←→ Query39.6177
NC_015690:4361000Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.0888 %Subject ←→ Query40.7943
NC_013406:3400114Paenibacillus sp. Y412MC10 chromosome, complete genome75.9406 %Subject ←→ Query41.0068
NC_011027:1570955*Chlorobaculum parvum NCIB 8327, complete genome77.3407 %Subject ←→ Query41.9062
NC_003308:1Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence75.1501 %Subject ←→ Query43.6752
NC_015690:1186545Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.9988 %Subject ←→ Query48.7524
NC_010337:2848360*Heliobacterium modesticaldum Ice1, complete genome75.72 %Subject ←→ Query48.8605
NC_015690:6521740*Paenibacillus mucilaginosus KNP414 chromosome, complete genome76.1581 %Subject ←→ Query51.0614