Pre_GI: OUP Neighbours

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Query: NC_010741:745357 Treponema pallidum subsp. pallidum SS14, complete genome

D: 37.2477

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Treponema pallidum subsp. pallidum SS14 was isolated in 1977 from a patient with secondary syphilis. This strain is less susceptible than the Nichols strain for a number of antibiotics. This organisms is divided into subspecies each of which causes a specific disease. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem.

Number of Neighbours: 14




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015714:1*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome75.3799 %Subject ←→ Query32.2258
NC_015714:238891*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome78.7316 %Subject ←→ Query33.229
NC_010741:949732*Treponema pallidum subsp. pallidum SS14, complete genome80.3554 %Subject ←→ Query33.6941
NC_000919:107373*Treponema pallidum subsp. pallidum str. Nichols, complete genome81.5411 %Subject ←→ Query33.8461
NC_010741:107370*Treponema pallidum subsp. pallidum SS14, complete genome81.5411 %Subject ←→ Query33.9494
NC_015714:943178*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome77.5245 %Subject ←→ Query34.2929
NC_010741:775000*Treponema pallidum subsp. pallidum SS14, complete genome79.4118 %Subject ←→ Query34.3142
NC_000919:948287*Treponema pallidum subsp. pallidum str. Nichols, complete genome80.2665 %Subject ←→ Query35.037
NC_000919:746875Treponema pallidum subsp. pallidum str. Nichols, complete genome93.8603 %Subject ←→ Query35.1998
NC_015714:768500*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome82.8585 %Subject ←→ Query35.483
NC_015714:741044*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome92.2794 %Subject ←→ Query36.7394
NC_000919:773784Treponema pallidum subsp. pallidum str. Nichols, complete genome79.4914 %Subject ←→ Query36.964
NC_000919:12545*Treponema pallidum subsp. pallidum str. Nichols, complete genome79.6722 %Subject ←→ Query37.2678
NC_010741:12542*Treponema pallidum subsp. pallidum SS14, complete genome79.6661 %Subject ←→ Query37.3966