Pre_GI: OUP Neighbours

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Query: NC_010610:908452 Lactobacillus fermentum IFO 3956, complete genome

D: 43.1435

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.

Number of Neighbours: 7

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_000911:2511514*Synechocystis sp. PCC 6803, complete genome75.0061 %Subject Query24.8906
NC_015428:2291430*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome76.9332 %Subject Query30.5599
NC_015428:823420*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome76.1244 %Subject ←→ Query37.54
NC_015428:700479*Lactobacillus buchneri NRRL B-30929 chromosome, complete genome75.5239 %Subject ←→ Query38.8838
NC_010610:1765000Lactobacillus fermentum IFO 3956, complete genome78.0055 %Subject ←→ Query39.8309
NC_010610:1178430Lactobacillus fermentum IFO 3956, complete genome81.8903 %Subject ←→ Query41.4499
NC_010610:1385066*Lactobacillus fermentum IFO 3956, complete genome76.5074 %Subject ←→ Query43.1625