Pre_GI: OUP Neighbours

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Query: NC_010610:1765000 Lactobacillus fermentum IFO 3956, complete genome

D: 39.8309

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.

Number of Neighbours: 3

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010610:1178430Lactobacillus fermentum IFO 3956, complete genome81.1642 %Subject ←→ Query41.4499
NC_010610:908452Lactobacillus fermentum IFO 3956, complete genome78.0055 %Subject ←→ Query43.1435
NC_010610:1385066*Lactobacillus fermentum IFO 3956, complete genome79.5067 %Subject ←→ Query43.1625