Pre_GI: OUP Neighbours

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Query: NC_010513:1590758 Xylella fastidiosa M12 chromosome, complete genome

D: 43.326

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Causal agent of citrus variegated chlorosis. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. This disease was first noticed in Brazil in 1987, and it greatly affects commercial orchards resulting in crop devastation worldwide. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. The bacteria are transmitted from the gut of the insect vector (sharpshooter leafhopper) to the plant xylem (water conducting system) when the insect feeds. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

Number of Neighbours: 22

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_002488:2235883Xylella fastidiosa 9a5c, complete genome92.7665 %Subject ←→ Query33.7761
NC_002488:45219*Xylella fastidiosa 9a5c, complete genome83.5692 %Subject ←→ Query34.1567
NC_002488:2546495Xylella fastidiosa 9a5c, complete genome84.7396 %Subject ←→ Query34.3385
NC_002488:1157684Xylella fastidiosa 9a5c, complete genome80.242 %Subject ←→ Query34.9246
NC_002488:2502000*Xylella fastidiosa 9a5c, complete genome77.9841 %Subject ←→ Query35.6822
NC_004556:1933944Xylella fastidiosa Temecula1, complete genome81.8015 %Subject ←→ Query37.8222
NC_010513:44886*Xylella fastidiosa M12 chromosome, complete genome84.0257 %Subject ←→ Query38.5518
NC_004556:1132354*Xylella fastidiosa Temecula1, complete genome77.356 %Subject ←→ Query38.8649
NC_004556:151593*Xylella fastidiosa Temecula1, complete genome82.0895 %Subject ←→ Query39.9027
NC_010513:1128000Xylella fastidiosa M12 chromosome, complete genome75.8977 %Subject ←→ Query40.9199
NC_004556:1611973Xylella fastidiosa Temecula1, complete genome93.8909 %Subject ←→ Query42.9799