Pre_GI: OUP Neighbours

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Query: NC_010513:1443787 Xylella fastidiosa M12 chromosome, complete genome

D: 37.8548

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Causal agent of citrus variegated chlorosis. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. This disease was first noticed in Brazil in 1987, and it greatly affects commercial orchards resulting in crop devastation worldwide. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. The bacteria are transmitted from the gut of the insect vector (sharpshooter leafhopper) to the plant xylem (water conducting system) when the insect feeds. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

Number of Neighbours: 28




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_002488:2070975*Xylella fastidiosa 9a5c, complete genome83.3946 %Subject ←→ Query33.8552
NC_002488:2657274*Xylella fastidiosa 9a5c, complete genome75.1899 %Subject ←→ Query35.9447
NC_002488:842377Xylella fastidiosa 9a5c, complete genome82.5521 %Subject ←→ Query36.5516
NC_010513:2031936Xylella fastidiosa M12 chromosome, complete genome82.5245 %Subject ←→ Query39.3969
NC_004556:2495712*Xylella fastidiosa Temecula1, complete genome83.2138 %Subject ←→ Query39.8194
NC_004556:1442000Xylella fastidiosa Temecula1, complete genome81.4246 %Subject ←→ Query39.8468
NC_004556:1641985Xylella fastidiosa Temecula1, complete genome75.9252 %Subject ←→ Query40.9959
NC_010513:2452811*Xylella fastidiosa M12 chromosome, complete genome77.9013 %Subject ←→ Query42.3358
NC_004556:2078000Xylella fastidiosa Temecula1, complete genome83.0208 %Subject ←→ Query42.5175
NC_010577:2093261Xylella fastidiosa M23, complete genome82.0956 %Subject ←→ Query42.8364
NC_010577:1188438Xylella fastidiosa M23, complete genome84.7457 %Subject ←→ Query43.0953
NC_004556:1178897Xylella fastidiosa Temecula1, complete genome84.7457 %Subject ←→ Query43.3532
NC_010577:1456909*Xylella fastidiosa M23, complete genome90.1072 %Subject ←→ Query43.5098
NC_010577:2513241*Xylella fastidiosa M23, complete genome75.7384 %Subject ←→ Query43.5174