Pre_GI: OUP Neighbours

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Query: NC_010475:420978 Synechococcus sp. PCC 7002, complete genome

D: 35.6235

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

Number of Neighbours: 32

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010474:19256Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence82.6379 %Subject Query24.3008
NC_000911:2511514*Synechocystis sp. PCC 6803, complete genome77.1507 %Subject Query24.8906
NC_000911:2043938*Synechocystis sp. PCC 6803, complete genome77.1415 %Subject Query25.1398
NC_000911:1957758*Synechocystis sp. PCC 6803, complete genome81.7463 %Subject ←→ Query25.8755
NC_010475:1563578*Synechococcus sp. PCC 7002, complete genome79.0165 %Subject ←→ Query25.9272
NC_010475:2537500*Synechococcus sp. PCC 7002, complete genome80.5423 %Subject ←→ Query26.1339
NC_000911:96325Synechocystis sp. PCC 6803, complete genome76.1213 %Subject ←→ Query26.3321
NC_011884:1821862Cyanothece sp. PCC 7425, complete genome75.3493 %Subject ←→ Query26.6912
NC_010475:953618Synechococcus sp. PCC 7002, complete genome79.1023 %Subject ←→ Query26.9759
NC_000911:240863*Synechocystis sp. PCC 6803, complete genome75.4473 %Subject ←→ Query27.365
NC_000911:3478000Synechocystis sp. PCC 6803, complete genome77.4112 %Subject ←→ Query27.513
NC_000911:2747604Synechocystis sp. PCC 6803, complete genome75.7138 %Subject ←→ Query28.0399
NC_013161:1878700Cyanothece sp. PCC 8802, complete genome77.0741 %Subject ←→ Query28.2787
NC_015510:5539153Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome75.0858 %Subject ←→ Query28.7573
NC_011726:1911500Cyanothece sp. PCC 8801, complete genome75.8333 %Subject ←→ Query28.9962
NC_000911:1718820*Synechocystis sp. PCC 6803, complete genome76.0999 %Subject ←→ Query29.174
NC_000911:2777447*Synechocystis sp. PCC 6803, complete genome76.6851 %Subject ←→ Query29.3265
NC_000911:1191445Synechocystis sp. PCC 6803, complete genome75.3922 %Subject ←→ Query29.5591
NC_000911:3436529Synechocystis sp. PCC 6803, complete genome77.1078 %Subject ←→ Query29.5991
NC_009925:6024888Acaryochloris marina MBIC11017, complete genome75.8977 %Subject ←→ Query29.7141
NC_000911:1284552*Synechocystis sp. PCC 6803, complete genome77.2886 %Subject ←→ Query30.0663
NC_010475:649177*Synechococcus sp. PCC 7002, complete genome83.3517 %Subject ←→ Query30.186
NC_010475:2188827*Synechococcus sp. PCC 7002, complete genome84.2739 %Subject ←→ Query30.8666
NC_015510:4674774*Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome75.5484 %Subject ←→ Query33.2182
NC_010475:1671823*Synechococcus sp. PCC 7002, complete genome78.7224 %Subject ←→ Query33.4205
NC_010296:5484624Microcystis aeruginosa NIES-843, complete genome75.4381 %Subject ←→ Query33.688
NC_015510:4982255*Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome76.0999 %Subject ←→ Query34.5223
NC_015510:6373937*Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome75.0766 %Subject ←→ Query34.6043
NC_010475:1582856Synechococcus sp. PCC 7002, complete genome79.614 %Subject ←→ Query36.1749
NC_011884:3302500Cyanothece sp. PCC 7425, complete genome75.2053 %Subject ←→ Query36.5317
NC_010475:1161000Synechococcus sp. PCC 7002, complete genome82.258 %Subject ←→ Query38.0701
NC_010296:54000Microcystis aeruginosa NIES-843, complete genome77.0404 %Subject ←→ Query39.713