Pre_GI: OUP Neighbours

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Query: NC_010475:1671823 Synechococcus sp. PCC 7002, complete genome

D: 33.4205

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

Number of Neighbours: 21




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010474:19256Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence76.5074 %Subject ←→ Query24.3008
NC_000911:1957758*Synechocystis sp. PCC 6803, complete genome75.7874 %Subject ←→ Query25.8755
NC_010475:1563578*Synechococcus sp. PCC 7002, complete genome79.2892 %Subject ←→ Query25.9272
NC_010475:2537500*Synechococcus sp. PCC 7002, complete genome78.4436 %Subject ←→ Query26.1339
NC_010475:953618Synechococcus sp. PCC 7002, complete genome80.2819 %Subject ←→ Query26.9759
NC_000911:240863*Synechocystis sp. PCC 6803, complete genome75.9896 %Subject ←→ Query27.365
NC_000911:3478000Synechocystis sp. PCC 6803, complete genome75.2022 %Subject ←→ Query27.513
NC_011884:1591430Cyanothece sp. PCC 7425, complete genome75.4075 %Subject ←→ Query27.6933
NC_011884:1541256*Cyanothece sp. PCC 7425, complete genome75.2849 %Subject ←→ Query28.5431
NC_000911:2777447*Synechocystis sp. PCC 6803, complete genome76.057 %Subject ←→ Query29.3265
NC_011884:3393500Cyanothece sp. PCC 7425, complete genome75.9191 %Subject ←→ Query29.5515
NC_000911:3436529Synechocystis sp. PCC 6803, complete genome75.0643 %Subject ←→ Query29.5991
NC_000911:1284552*Synechocystis sp. PCC 6803, complete genome76.2194 %Subject ←→ Query30.0663
NC_010475:649177*Synechococcus sp. PCC 7002, complete genome80.7016 %Subject ←→ Query30.186
NC_010475:2188827*Synechococcus sp. PCC 7002, complete genome80.6066 %Subject ←→ Query30.8666
NC_011884:393328Cyanothece sp. PCC 7425, complete genome75.2911 %Subject ←→ Query31.1279
NC_011884:1665888Cyanothece sp. PCC 7425, complete genome75.2298 %Subject ←→ Query31.164
NC_010475:2896000*Synechococcus sp. PCC 7002, complete genome77.5674 %Subject ←→ Query32.4872
NC_010475:420978*Synechococcus sp. PCC 7002, complete genome78.7224 %Subject ←→ Query35.6235
NC_010475:1161000Synechococcus sp. PCC 7002, complete genome81.9056 %Subject ←→ Query38.0701
NC_011884:2194767Cyanothece sp. PCC 7425, complete genome75.2512 %Subject ←→ Query38.2207