Pre_GI: OUP Neighbours

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Query: NC_010475:1582856 Synechococcus sp. PCC 7002, complete genome

D: 36.1749

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

Number of Neighbours: 46




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009930:152500*Acaryochloris marina MBIC11017 plasmid pREB5, complete sequence75.53 %Subject ←→ Query35.8433
NC_009925:1184442*Acaryochloris marina MBIC11017, complete genome79.2433 %Subject ←→ Query29.9854
NC_009925:6024888Acaryochloris marina MBIC11017, complete genome77.6072 %Subject ←→ Query29.7141
NC_009925:5957806Acaryochloris marina MBIC11017, complete genome76.7371 %Subject ←→ Query37.7888
NC_009925:3344894Acaryochloris marina MBIC11017, complete genome78.894 %Subject ←→ Query29.5385
NC_009925:2533547Acaryochloris marina MBIC11017, complete genome77.6103 %Subject ←→ Query28.125
NC_014960:1697818Anaerolinea thermophila UNI-1, complete genome75.5699 %Subject ←→ Query37.5329
NC_011884:4366831Cyanothece sp. PCC 7425, complete genome77.6624 %Subject ←→ Query39.9505
NC_011884:2584791Cyanothece sp. PCC 7425, complete genome75.0368 %Subject ←→ Query31.6249
NC_011884:3881568Cyanothece sp. PCC 7425, complete genome76.3082 %Subject ←→ Query31.412
NC_011884:1998559Cyanothece sp. PCC 7425, complete genome77.1385 %Subject ←→ Query33.0833
NC_011884:3648561*Cyanothece sp. PCC 7425, complete genome76.443 %Subject ←→ Query27.8859
NC_011884:1821862Cyanothece sp. PCC 7425, complete genome78.5294 %Subject ←→ Query26.6912
NC_011884:3393500Cyanothece sp. PCC 7425, complete genome77.4112 %Subject ←→ Query29.5515
NC_011884:1665888Cyanothece sp. PCC 7425, complete genome76.0417 %Subject ←→ Query31.164
NC_011884:3302500Cyanothece sp. PCC 7425, complete genome78.6428 %Subject ←→ Query36.5317
NC_011884:831905Cyanothece sp. PCC 7425, complete genome76.6115 %Subject ←→ Query32.892
NC_011884:1541256*Cyanothece sp. PCC 7425, complete genome79.0809 %Subject ←→ Query28.5431
NC_011884:3099488Cyanothece sp. PCC 7425, complete genome78.6121 %Subject ←→ Query32.2939
NC_011884:5019500*Cyanothece sp. PCC 7425, complete genome80.8762 %Subject ←→ Query37.0347
NC_011884:2817054Cyanothece sp. PCC 7425, complete genome77.8278 %Subject ←→ Query29.0641
NC_011726:1911500Cyanothece sp. PCC 8801, complete genome76.6176 %Subject ←→ Query28.9962
NC_013161:1878700Cyanothece sp. PCC 8802, complete genome77.0741 %Subject ←→ Query28.2787
NC_012108:4417483Desulfobacterium autotrophicum HRM2, complete genome76.0784 %Subject ←→ Query30.3758
NC_012108:3878500Desulfobacterium autotrophicum HRM2, complete genome75.4044 %Subject ←→ Query30.0501
NC_015510:6373937*Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome77.019 %Subject ←→ Query34.6043
NC_015510:4065753Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome75.0643 %Subject ←→ Query32.6986
NC_015510:2398434Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome75.9191 %Subject ←→ Query30.8582
NC_015510:1234500*Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome75.7904 %Subject ←→ Query34.1509
NC_010628:675445Nostoc punctiforme PCC 73102, complete genome75.9896 %Subject ←→ Query36.3844
NC_008820:1356858*Prochlorococcus marinus str. MIT 9303, complete genome76.9761 %Subject ←→ Query42.9268
NC_005071:588541*Prochlorococcus marinus str. MIT 9313, complete genome75.6373 %Subject ←→ Query30.6846
NC_008319:171847*Synechococcus sp. CC9311, complete genome75.9161 %Subject Query46.3349
NC_008319:1119076Synechococcus sp. CC9311, complete genome76.1458 %Subject ←→ Query35.0962
NC_010474:19256Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence77.2212 %Subject Query24.3008
NC_010475:953618Synechococcus sp. PCC 7002, complete genome76.4246 %Subject ←→ Query26.9759
NC_010475:420978*Synechococcus sp. PCC 7002, complete genome79.614 %Subject ←→ Query35.6235
NC_010475:2537500*Synechococcus sp. PCC 7002, complete genome77.5827 %Subject Query26.1339
NC_010475:2188827*Synechococcus sp. PCC 7002, complete genome81.1244 %Subject ←→ Query30.8666
NC_010475:1563578*Synechococcus sp. PCC 7002, complete genome77.1232 %Subject Query25.9272
NC_010475:1161000Synechococcus sp. PCC 7002, complete genome78.4896 %Subject ←→ Query38.0701
NC_000911:2043938*Synechocystis sp. PCC 6803, complete genome75.0398 %Subject Query25.1398
NC_000911:1957758*Synechocystis sp. PCC 6803, complete genome77.3468 %Subject Query25.8755
NC_000911:1284552*Synechocystis sp. PCC 6803, complete genome76.0999 %Subject ←→ Query30.0663
NC_000911:3436529Synechocystis sp. PCC 6803, complete genome75.0797 %Subject ←→ Query29.5991
NC_014225:1403007*Waddlia chondrophila WSU 86-1044 chromosome, complete genome75.0919 %Subject Query24.6231