Pre_GI: OUP Neighbours

Some Help

Query: NC_010474:19256 Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequence

D: 24.3008

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

Number of Neighbours: 26




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_000911:2511514*Synechocystis sp. PCC 6803, complete genome75.0827 %Subject ←→ Query24.8906
NC_000911:2043938*Synechocystis sp. PCC 6803, complete genome76.6054 %Subject ←→ Query25.1398
NC_000911:1957758*Synechocystis sp. PCC 6803, complete genome78.9246 %Subject ←→ Query25.8755
NC_010475:1563578*Synechococcus sp. PCC 7002, complete genome76.3664 %Subject ←→ Query25.9272
NC_010475:2537500*Synechococcus sp. PCC 7002, complete genome77.4203 %Subject ←→ Query26.1339
NC_011884:1821862Cyanothece sp. PCC 7425, complete genome76.4614 %Subject ←→ Query26.6912
NC_010475:953618Synechococcus sp. PCC 7002, complete genome77.1201 %Subject ←→ Query26.9759
NC_000911:3478000Synechocystis sp. PCC 6803, complete genome75.6311 %Subject ←→ Query27.513
NC_013161:1878700Cyanothece sp. PCC 8802, complete genome75.2083 %Subject ←→ Query28.2787
NC_000911:2777447*Synechocystis sp. PCC 6803, complete genome77.2028 %Subject ←→ Query29.3265
NC_011884:3393500Cyanothece sp. PCC 7425, complete genome76.0968 %Subject ←→ Query29.5515
NC_000911:1191445Synechocystis sp. PCC 6803, complete genome76.4675 %Subject ←→ Query29.5591
NC_000911:3436529Synechocystis sp. PCC 6803, complete genome75.8854 %Subject ←→ Query29.5991
NC_009925:6024888Acaryochloris marina MBIC11017, complete genome76.6544 %Subject ←→ Query29.7141
NC_000911:1284552*Synechocystis sp. PCC 6803, complete genome76.1397 %Subject ←→ Query30.0663
NC_010475:649177*Synechococcus sp. PCC 7002, complete genome80.2482 %Subject ←→ Query30.186
NC_010475:2188827*Synechococcus sp. PCC 7002, complete genome81.2071 %Subject ←→ Query30.8666
NC_011884:3881568Cyanothece sp. PCC 7425, complete genome77.2672 %Subject ←→ Query31.412
NC_011884:831905Cyanothece sp. PCC 7425, complete genome75.1746 %Subject ←→ Query32.892
NC_010475:1671823*Synechococcus sp. PCC 7002, complete genome76.5074 %Subject ←→ Query33.4205
NC_015510:6373937*Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome75.0306 %Subject Query34.6043
NC_010475:420978*Synechococcus sp. PCC 7002, complete genome82.6379 %Subject Query35.6235
NC_010475:1582856Synechococcus sp. PCC 7002, complete genome77.2212 %Subject Query36.1749
NC_011884:3302500Cyanothece sp. PCC 7425, complete genome76.9363 %Subject Query36.5317
NC_011884:5019500*Cyanothece sp. PCC 7425, complete genome76.2224 %Subject Query37.0347
NC_010475:1161000Synechococcus sp. PCC 7002, complete genome77.9963 %Subject Query38.0701