Pre_GI: OUP Neighbours

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Query: NC_010473:4256000 Escherichia coli str. K-12 substr. DH10B, complete genome

D: 36.1868

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 17




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_004631:283289*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.9712 %Subject ←→ Query31.6756
NC_012880:3915500*Dickeya dadantii Ech703, complete genome75.8578 %Subject ←→ Query32.55
NC_010102:283364*Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,76.1305 %Subject ←→ Query33.8947
NC_002695:4153394*Escherichia coli O157:H7 str. Sakai, complete genome75.8517 %Subject ←→ Query34.7398
NC_013282:3962188*Cronobacter turicensis, complete genome79.5221 %Subject ←→ Query34.8164
NC_006511:4119332*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC83.413 %Subject ←→ Query35.1897
NC_013716:4728500*Citrobacter rodentium ICC168, complete genome75.2359 %Subject ←→ Query35.4511
NC_003198:3586000*Salmonella enterica subsp. enterica serovar Typhi str. CT18,85.1409 %Subject ←→ Query35.6335
NC_011750:4543135*Escherichia coli IAI39 chromosome, complete genome84.1544 %Subject ←→ Query36.053
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.0551 %Subject ←→ Query36.3874
NC_011080:2789744*Salmonella enterica subsp. enterica serovar Newport str. SL254,79.4638 %Subject ←→ Query36.512
NC_000913:4159090*Escherichia coli K12, complete genome91.7708 %Subject ←→ Query36.6397
CU928160:4248621*Escherichia coli IAI1 chromosome, complete genome88.4926 %Subject ←→ Query38.0654
NC_010468:4455201*Escherichia coli ATCC 8739, complete genome91.3021 %Subject ←→ Query38.0958
NC_003198:2703013*Salmonella enterica subsp. enterica serovar Typhi str. CT18,79.519 %Subject ←→ Query38.1505
NC_006511:3364448*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.3248 %Subject ←→ Query38.4606
NC_006905:2805877*Salmonella enterica subsp. enterica serovar Choleraesuis str79.087 %Subject ←→ Query39.786