Pre_GI: OUP Neighbours

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Query: NC_010161:2381195 Bartonella tribocorum CIP 105476, complete genome

D: 27.8149

Host Lineage: Bartonella tribocorum; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism was isolated from the blood of wild rats and from fleas obtained from wild rats. Transmission of these organisms is often through an insect vector. Once in a host, this intracellular pathogen is internalized by an actin-dependent mechanism, and primarily targets endothelial cells, although other cells can be infected. The proliferation of the vascular endothelium (bacillary angiomatosis) is characterisitic of Bartonella infection and results in multiplication of the bacterium's host cells. Infected macrophages are stimulated to release vascular endothelial growth factor (VEGF) and interleukin 1 beta, both of which promote angiogenesis. Endothelial cells are also stimulated to grow and divide by direct contact with bacterial cells. In addition, programmed cell death (apoptosis) of endothelial cells is inhibited, combatting a common mechanism eukaryotic cells use to deal with bacterial infection. Other pathogenicity factors include pili and outer membrane adhesins for attachment to host cells. This organism is genetically related to Bartonella elizabethae which was isolated from a case of endocarditis in a human.

Number of Neighbours: 112




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014774:671695Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete77.3438 %Subject ←→ Query20.4767
NC_014774:1019273*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete77.6348 %Subject ←→ Query20.9083
NC_015702:2902934Parachlamydia acanthamoebae UV7, complete genome77.9994 %Subject ←→ Query21.0552
NC_014932:1387818*Bartonella clarridgeiae 73, complete genome85.8027 %Subject ←→ Query21.3964
NC_014774:1057856*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete76.204 %Subject ←→ Query21.4019
NC_014932:1084422Bartonella clarridgeiae 73, complete genome81.2255 %Subject ←→ Query21.5217
NC_014774:239865*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete76.6728 %Subject ←→ Query21.6014
NC_008783:29972*Bartonella bacilliformis KC583, complete genome83.5355 %Subject ←→ Query21.9601
NC_012985:815040*Candidatus Liberibacter asiaticus str. psy62, complete genome77.1477 %Subject ←→ Query22.0787
NC_014932:985882*Bartonella clarridgeiae 73, complete genome79.9357 %Subject ←→ Query22.4135
NC_008783:507939*Bartonella bacilliformis KC583, complete genome76.5625 %Subject ←→ Query22.5043
NC_005955:139907*Bartonella quintana str. Toulouse, complete genome81.0478 %Subject ←→ Query22.5833
NC_005955:427142Bartonella quintana str. Toulouse, complete genome82.2518 %Subject ←→ Query22.7748
NC_002942:2943206Legionella pneumophila subsp. pneumophila str. Philadelphia 1,75.7996 %Subject ←→ Query22.7983
NC_005955:841781*Bartonella quintana str. Toulouse, complete genome81.345 %Subject ←→ Query23.0636
NC_011528:647401Coxiella burnetii CbuK_Q154, complete genome76.0386 %Subject ←→ Query23.1688
NC_005956:1111500*Bartonella henselae str. Houston-1, complete genome79.7763 %Subject ←→ Query23.1973
NC_002971:619355Coxiella burnetii RSA 493, complete genome75.8425 %Subject ←→ Query23.2807
NC_012985:465354*Candidatus Liberibacter asiaticus str. psy62, complete genome76.2469 %Subject ←→ Query23.2997
NC_005956:1888500*Bartonella henselae str. Houston-1, complete genome82.1262 %Subject ←→ Query23.3341
NC_005956:152497*Bartonella henselae str. Houston-1, complete genome81.8199 %Subject ←→ Query23.6077
NC_005956:1221352*Bartonella henselae str. Houston-1, complete genome86.6667 %Subject ←→ Query23.6912
NC_008783:671349*Bartonella bacilliformis KC583, complete genome79.5343 %Subject ←→ Query23.7232
NC_010117:700112Coxiella burnetii RSA 331, complete genome76.1366 %Subject ←→ Query23.7977
NC_011527:1255998Coxiella burnetii CbuG_Q212, complete genome75.1562 %Subject ←→ Query23.804
NC_008783:119758*Bartonella bacilliformis KC583, complete genome85.576 %Subject ←→ Query24.2765
NC_006368:3028286Legionella pneumophila str. Paris, complete genome75.3186 %Subject ←→ Query24.3495
NC_005955:1540838Bartonella quintana str. Toulouse, complete genome84.3137 %Subject ←→ Query24.7325
NC_012846:825341*Bartonella grahamii as4aup, complete genome81.8964 %Subject ←→ Query24.9574
NC_002663:564958Pasteurella multocida subsp. multocida str. Pm70, complete genome76.4828 %Subject ←→ Query25.0787
NC_005955:1029435*Bartonella quintana str. Toulouse, complete genome85.9681 %Subject ←→ Query25.1664
NC_012985:1*Candidatus Liberibacter asiaticus str. psy62, complete genome75.7445 %Subject ←→ Query25.264
NC_005955:1205836*Bartonella quintana str. Toulouse, complete genome77.4724 %Subject ←→ Query25.4317
NC_005955:947500*Bartonella quintana str. Toulouse, complete genome83.0362 %Subject ←→ Query25.8177
NC_014774:1120383*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete76.9884 %Subject ←→ Query25.8217
NC_005956:699206*Bartonella henselae str. Houston-1, complete genome81.345 %Subject ←→ Query25.8289
NC_005956:1616804Bartonella henselae str. Houston-1, complete genome79.5588 %Subject ←→ Query26.0062
NC_012846:1679184*Bartonella grahamii as4aup, complete genome79.4363 %Subject ←→ Query26.0652
NC_010161:596034*Bartonella tribocorum CIP 105476, complete genome80.9252 %Subject ←→ Query26.0944
NC_013009:689978*Neorickettsia risticii str. Illinois, complete genome75.3002 %Subject ←→ Query26.5139
NC_015222:1203465*Nitrosomonas sp. AL212 chromosome, complete genome75.0306 %Subject ←→ Query26.6263
NC_012846:1551000Bartonella grahamii as4aup, complete genome86.2408 %Subject ←→ Query26.6496
NC_009848:161373Bacillus pumilus SAFR-032, complete genome77.8891 %Subject ←→ Query26.7084
NC_015222:1127675*Nitrosomonas sp. AL212 chromosome, complete genome76.6238 %Subject ←→ Query26.9638
NC_012982:2730000Hirschia baltica ATCC 49814, complete genome79.5987 %Subject ←→ Query27.1485
NC_012846:2299282Bartonella grahamii as4aup, complete genome85.6127 %Subject ←→ Query27.5544
NC_012846:1467446*Bartonella grahamii as4aup, complete genome83.2721 %Subject ←→ Query27.6969
NC_007520:903799*Thiomicrospira crunogena XCL-2, complete genome76.296 %Subject ←→ Query27.7177
NC_012846:1837924*Bartonella grahamii as4aup, complete genome80.3186 %Subject ←→ Query27.7766
NC_012846:2154000*Bartonella grahamii as4aup, complete genome90.1226 %Subject ←→ Query27.9365
NC_015222:2089767*Nitrosomonas sp. AL212 chromosome, complete genome75.0643 %Subject ←→ Query28.1185
NC_008783:222000*Bartonella bacilliformis KC583, complete genome80.3676 %Subject ←→ Query28.2988
NC_005956:1455496*Bartonella henselae str. Houston-1, complete genome77.3652 %Subject ←→ Query28.4523
NC_010161:2100500Bartonella tribocorum CIP 105476, complete genome80 %Subject ←→ Query28.6669
NC_013721:533048Gardnerella vaginalis 409-05, complete genome78.3456 %Subject ←→ Query28.7101
NC_015222:2683056Nitrosomonas sp. AL212 chromosome, complete genome75.5055 %Subject ←→ Query28.941
NC_005955:173436*Bartonella quintana str. Toulouse, complete genome81.1489 %Subject ←→ Query28.9987
NC_012982:2772976Hirschia baltica ATCC 49814, complete genome76.9761 %Subject ←→ Query29.0125
NC_010161:1914000*Bartonella tribocorum CIP 105476, complete genome78.9399 %Subject ←→ Query29.0734
NC_015222:2136657*Nitrosomonas sp. AL212 chromosome, complete genome75.2941 %Subject ←→ Query29.1491
NC_014932:1232346*Bartonella clarridgeiae 73, complete genome77.9442 %Subject ←→ Query29.2886
NC_007514:904565Chlorobium chlorochromatii CaD3, complete genome76.3909 %Subject ←→ Query29.4258
NC_009654:2940278Marinomonas sp. MWYL1, complete genome77.788 %Subject ←→ Query29.6145
NC_012985:779279*Candidatus Liberibacter asiaticus str. psy62, complete genome75.144 %Subject ←→ Query29.7027
NC_009654:4253431*Marinomonas sp. MWYL1, complete genome76.4277 %Subject ←→ Query29.9246
NC_009654:1123709*Marinomonas sp. MWYL1, complete genome75.2696 %Subject ←→ Query29.9895
NC_005956:1402500*Bartonella henselae str. Houston-1, complete genome78.8297 %Subject ←→ Query30.0291
NC_009654:3215205*Marinomonas sp. MWYL1, complete genome78.2108 %Subject ←→ Query30.1455
NC_015276:1947936*Marinomonas mediterranea MMB-1 chromosome, complete genome75.9865 %Subject ←→ Query30.3016
NC_009654:3849774*Marinomonas sp. MWYL1, complete genome75.7077 %Subject ←→ Query30.3052
NC_009654:2309365*Marinomonas sp. MWYL1, complete genome76.6605 %Subject ←→ Query30.338
NC_012982:1899973Hirschia baltica ATCC 49814, complete genome77.9688 %Subject ←→ Query30.3976
NC_012982:1569426Hirschia baltica ATCC 49814, complete genome78.3487 %Subject ←→ Query30.411
NC_012881:1802000*Desulfovibrio salexigens DSM 2638, complete genome75.8058 %Subject ←→ Query30.7507
NC_012846:1741000*Bartonella grahamii as4aup, complete genome77.7911 %Subject ←→ Query30.8062
NC_005956:1572500*Bartonella henselae str. Houston-1, complete genome80.1808 %Subject ←→ Query30.815
NC_015276:632206Marinomonas mediterranea MMB-1 chromosome, complete genome75.3462 %Subject ←→ Query30.8175
NC_012846:1888000*Bartonella grahamii as4aup, complete genome79.5772 %Subject ←→ Query30.8764
NC_005956:818000*Bartonella henselae str. Houston-1, complete genome77.4939 %Subject ←→ Query30.9278
NC_010161:205500Bartonella tribocorum CIP 105476, complete genome76.2255 %Subject ←→ Query31.0171
NC_015276:1426000Marinomonas mediterranea MMB-1 chromosome, complete genome75.4749 %Subject ←→ Query31.0494
NC_015276:2769000Marinomonas mediterranea MMB-1 chromosome, complete genome79.3474 %Subject ←→ Query31.3112
NC_013416:1621469Aggregatibacter actinomycetemcomitans D11S-1, complete genome75.5913 %Subject ←→ Query31.4418
NC_009654:2958316*Marinomonas sp. MWYL1, complete genome77.7053 %Subject ←→ Query31.4845
NC_010161:432000Bartonella tribocorum CIP 105476, complete genome77.5827 %Subject ←→ Query31.5495
NC_010161:1368500*Bartonella tribocorum CIP 105476, complete genome80.0306 %Subject ←→ Query31.6361
NC_015633:2327500*Vibrio anguillarum 775 chromosome chromosome I, complete sequence75.2083 %Subject ←→ Query31.752
NC_008344:2434344*Nitrosomonas eutropha C91, complete genome75.1348 %Subject ←→ Query31.7911
NC_011026:3009500*Chloroherpeton thalassium ATCC 35110, complete genome77.6685 %Subject ←→ Query31.8736
NC_011026:2533017*Chloroherpeton thalassium ATCC 35110, complete genome76.2806 %Subject ←→ Query31.9226
NC_010161:1501758*Bartonella tribocorum CIP 105476, complete genome83.2506 %Subject ←→ Query31.9674
NC_004459:767127*Vibrio vulnificus CMCP6 chromosome I, complete sequence75.8088 %Subject ←→ Query32.0829
NC_010161:1844452*Bartonella tribocorum CIP 105476, complete genome78.5846 %Subject ←→ Query32.1046
NC_011026:2450325Chloroherpeton thalassium ATCC 35110, complete genome75.3523 %Subject ←→ Query32.4678
NC_012881:4023895Desulfovibrio salexigens DSM 2638, complete genome75.7874 %Subject ←→ Query32.5868
NC_013203:472679*Atopobium parvulum DSM 20469, complete genome76.5656 %Subject ←→ Query33.4886
NC_008783:1101973*Bartonella bacilliformis KC583, complete genome77.7574 %Subject ←→ Query33.6628
NC_012846:1778443Bartonella grahamii as4aup, complete genome77.8156 %Subject ←→ Query34.1513
NC_005955:1166521*Bartonella quintana str. Toulouse, complete genome81.2776 %Subject ←→ Query34.2164
NC_012881:3004784Desulfovibrio salexigens DSM 2638, complete genome75.2022 %Subject ←→ Query34.3173
NC_004603:230000Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete75.4841 %Subject ←→ Query34.7279
NC_011060:514874Pelodictyon phaeoclathratiforme BU-1, complete genome77.4786 %Subject ←→ Query35.4838
NC_005139:305420Vibrio vulnificus YJ016 chromosome I, complete sequence75.4289 %Subject ←→ Query35.5808
NC_012997:2405500*Teredinibacter turnerae T7901, complete genome75.4105 %Subject ←→ Query36.1474
NC_012997:4545875Teredinibacter turnerae T7901, complete genome76.2806 %Subject ←→ Query37.5301
NC_002488:1099975*Xylella fastidiosa 9a5c, complete genome75.9896 %Subject Query38.4451
NC_015572:1252000Methylomonas methanica MC09 chromosome, complete genome75.4933 %Subject Query38.7541
NC_010831:2078329*Chlorobium phaeobacteroides BS1, complete genome75.3217 %Subject Query39.1588
NC_005363:1604337Bdellovibrio bacteriovorus HD100, complete genome75.3248 %Subject Query40.958
NC_004556:531000*Xylella fastidiosa Temecula1, complete genome76.5564 %Subject Query43.2204
NC_010577:530917*Xylella fastidiosa M23, complete genome76.8045 %Subject Query44.2251
NC_012917:1506083Pectobacterium carotovorum subsp. carotovorum PC1, complete genome75.1808 %Subject Query45.1848