Pre_GI: OUP Neighbours

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Query: NC_010161:2100500 Bartonella tribocorum CIP 105476, complete genome

D: 28.6669

Host Lineage: Bartonella tribocorum; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism was isolated from the blood of wild rats and from fleas obtained from wild rats. Transmission of these organisms is often through an insect vector. Once in a host, this intracellular pathogen is internalized by an actin-dependent mechanism, and primarily targets endothelial cells, although other cells can be infected. The proliferation of the vascular endothelium (bacillary angiomatosis) is characterisitic of Bartonella infection and results in multiplication of the bacterium's host cells. Infected macrophages are stimulated to release vascular endothelial growth factor (VEGF) and interleukin 1 beta, both of which promote angiogenesis. Endothelial cells are also stimulated to grow and divide by direct contact with bacterial cells. In addition, programmed cell death (apoptosis) of endothelial cells is inhibited, combatting a common mechanism eukaryotic cells use to deal with bacterial infection. Other pathogenicity factors include pili and outer membrane adhesins for attachment to host cells. This organism is genetically related to Bartonella elizabethae which was isolated from a case of endocarditis in a human.

Number of Neighbours: 91

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_011565:1*Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,75.1256 %Subject Query17.4809
NC_014774:671695Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete77.4724 %Subject ←→ Query20.4767
NC_014774:1019273*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete77.9105 %Subject ←→ Query20.9083
NC_014932:1387818*Bartonella clarridgeiae 73, complete genome79.9265 %Subject ←→ Query21.3964
NC_014774:1057856*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete77.4295 %Subject ←→ Query21.4019
NC_014932:1084422Bartonella clarridgeiae 73, complete genome77.0343 %Subject ←→ Query21.5217
NC_014774:239865*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete78.7868 %Subject ←→ Query21.6014
NC_008783:29972*Bartonella bacilliformis KC583, complete genome77.9228 %Subject ←→ Query21.9601
NC_012985:815040*Candidatus Liberibacter asiaticus str. psy62, complete genome77.9259 %Subject ←→ Query22.0787
NC_014932:985882*Bartonella clarridgeiae 73, complete genome77.4357 %Subject ←→ Query22.4135
NC_008783:507939*Bartonella bacilliformis KC583, complete genome75.3922 %Subject ←→ Query22.5043
NC_005955:139907*Bartonella quintana str. Toulouse, complete genome77.0343 %Subject ←→ Query22.5833
NC_005955:427142Bartonella quintana str. Toulouse, complete genome76.5165 %Subject ←→ Query22.7748
NC_002620:229856Chlamydia muridarum Nigg, complete genome77.9381 %Subject ←→ Query22.9754
NC_005955:841781*Bartonella quintana str. Toulouse, complete genome77.6317 %Subject ←→ Query23.0636
NC_005956:1111500*Bartonella henselae str. Houston-1, complete genome77.9565 %Subject ←→ Query23.1973
NC_012985:465354*Candidatus Liberibacter asiaticus str. psy62, complete genome78.2506 %Subject ←→ Query23.2997
NC_005956:1888500*Bartonella henselae str. Houston-1, complete genome76.5074 %Subject ←→ Query23.3341
NC_005956:152497*Bartonella henselae str. Houston-1, complete genome77.1752 %Subject ←→ Query23.6077
NC_005956:1221352*Bartonella henselae str. Houston-1, complete genome79.4118 %Subject ←→ Query23.6912
NC_008783:671349*Bartonella bacilliformis KC583, complete genome77.0588 %Subject ←→ Query23.7232
NC_008783:119758*Bartonella bacilliformis KC583, complete genome79.5466 %Subject ←→ Query24.2765
NC_005955:1540838Bartonella quintana str. Toulouse, complete genome77.0466 %Subject ←→ Query24.7325
NC_012846:825341*Bartonella grahamii as4aup, complete genome78.6734 %Subject ←→ Query24.9574
NC_007798:260324*Neorickettsia sennetsu str. Miyayama, complete genome77.4234 %Subject ←→ Query25.1505
NC_005955:1029435*Bartonella quintana str. Toulouse, complete genome77.9412 %Subject ←→ Query25.1664
NC_012985:1*Candidatus Liberibacter asiaticus str. psy62, complete genome76.3756 %Subject ←→ Query25.264
NC_005955:1205836*Bartonella quintana str. Toulouse, complete genome77.8585 %Subject ←→ Query25.4317
NC_007798:652317*Neorickettsia sennetsu str. Miyayama, complete genome78.4835 %Subject ←→ Query25.4323
NC_007798:547800*Neorickettsia sennetsu str. Miyayama, complete genome76.2071 %Subject ←→ Query25.5816
NC_005955:947500*Bartonella quintana str. Toulouse, complete genome78.0729 %Subject ←→ Query25.8177
NC_014774:1120383*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete79.3045 %Subject ←→ Query25.8217
NC_012985:123500*Candidatus Liberibacter asiaticus str. psy62, complete genome78.4099 %Subject ←→ Query25.8249
NC_005956:699206*Bartonella henselae str. Houston-1, complete genome78.1955 %Subject ←→ Query25.8289
NC_013009:353690*Neorickettsia risticii str. Illinois, complete genome78.2138 %Subject ←→ Query25.836
NC_005956:1616804Bartonella henselae str. Houston-1, complete genome82.886 %Subject ←→ Query26.0062
NC_012846:1679184*Bartonella grahamii as4aup, complete genome80.674 %Subject ←→ Query26.0652
NC_010161:596034*Bartonella tribocorum CIP 105476, complete genome78.3885 %Subject ←→ Query26.0944
NC_013009:270000*Neorickettsia risticii str. Illinois, complete genome78.2843 %Subject ←→ Query26.4713
NC_013009:689978*Neorickettsia risticii str. Illinois, complete genome78.1311 %Subject ←→ Query26.5139
NC_012846:1551000Bartonella grahamii as4aup, complete genome78.6795 %Subject ←→ Query26.6496
NC_009848:161373Bacillus pumilus SAFR-032, complete genome75.8793 %Subject ←→ Query26.7084
NC_007798:80500*Neorickettsia sennetsu str. Miyayama, complete genome77.0527 %Subject ←→ Query26.8539
NC_007798:301456*Neorickettsia sennetsu str. Miyayama, complete genome75.2053 %Subject ←→ Query27.1158
NC_012982:2730000Hirschia baltica ATCC 49814, complete genome75.9344 %Subject ←→ Query27.1485
NC_007798:586500*Neorickettsia sennetsu str. Miyayama, complete genome79.1299 %Subject ←→ Query27.1741
NC_012985:410307*Candidatus Liberibacter asiaticus str. psy62, complete genome75.7721 %Subject ←→ Query27.474
NC_012846:2299282Bartonella grahamii as4aup, complete genome78.2843 %Subject ←→ Query27.5544
NC_012846:1467446*Bartonella grahamii as4aup, complete genome79.5711 %Subject ←→ Query27.6969
NC_014774:995000*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete76.1979 %Subject ←→ Query27.721
NC_012846:1837924*Bartonella grahamii as4aup, complete genome77.549 %Subject ←→ Query27.7766
NC_010161:2381195Bartonella tribocorum CIP 105476, complete genome80 %Subject ←→ Query27.8149
NC_012846:2154000*Bartonella grahamii as4aup, complete genome82.0956 %Subject ←→ Query27.9365
NC_013009:562470*Neorickettsia risticii str. Illinois, complete genome75.3676 %Subject ←→ Query28.2716
NC_008783:222000*Bartonella bacilliformis KC583, complete genome80.9681 %Subject ←→ Query28.2988
NC_005956:1455496*Bartonella henselae str. Houston-1, complete genome77.837 %Subject ←→ Query28.4523
NC_013009:608515*Neorickettsia risticii str. Illinois, complete genome78.6581 %Subject ←→ Query28.6073
NC_013009:122000*Neorickettsia risticii str. Illinois, complete genome76.1244 %Subject ←→ Query28.6509
NC_013721:533048Gardnerella vaginalis 409-05, complete genome77.4265 %Subject ←→ Query28.7101
NC_015160:1117371Odoribacter splanchnicus DSM 20712 chromosome, complete genome75.1838 %Subject ←→ Query28.7816
NC_012985:846202*Candidatus Liberibacter asiaticus str. psy62, complete genome76.6605 %Subject ←→ Query28.926
NC_014011:813645*Aminobacterium colombiense DSM 12261 chromosome, complete genome75.383 %Subject ←→ Query28.9309
NC_005955:173436*Bartonella quintana str. Toulouse, complete genome79.1146 %Subject ←→ Query28.9987
NC_012982:2772976Hirschia baltica ATCC 49814, complete genome77.2886 %Subject ←→ Query29.0125
NC_010161:1914000*Bartonella tribocorum CIP 105476, complete genome79.4118 %Subject ←→ Query29.0734
NC_007797:441782*Anaplasma phagocytophilum HZ, complete genome76.4767 %Subject ←→ Query29.0886
NC_007798:703922*Neorickettsia sennetsu str. Miyayama, complete genome75.7353 %Subject ←→ Query29.158
NC_014932:1232346*Bartonella clarridgeiae 73, complete genome78.3915 %Subject ←→ Query29.2886
NC_007798:213069*Neorickettsia sennetsu str. Miyayama, complete genome78.8817 %Subject ←→ Query29.3906
NC_009654:2940278Marinomonas sp. MWYL1, complete genome77.3958 %Subject ←→ Query29.6145
NC_012985:779279*Candidatus Liberibacter asiaticus str. psy62, complete genome77.3131 %Subject ←→ Query29.7027
NC_009654:1123709*Marinomonas sp. MWYL1, complete genome75.0061 %Subject ←→ Query29.9895
NC_005956:1402500*Bartonella henselae str. Houston-1, complete genome79.1789 %Subject ←→ Query30.0291
NC_009654:3215205*Marinomonas sp. MWYL1, complete genome77.3836 %Subject ←→ Query30.1455
NC_009654:3849774*Marinomonas sp. MWYL1, complete genome75.3156 %Subject ←→ Query30.3052
NC_012982:1899973Hirschia baltica ATCC 49814, complete genome76.6575 %Subject ←→ Query30.3976
NC_012982:1569426Hirschia baltica ATCC 49814, complete genome75.2053 %Subject ←→ Query30.411
NC_012846:1741000*Bartonella grahamii as4aup, complete genome81.8045 %Subject ←→ Query30.8062
NC_005956:1572500*Bartonella henselae str. Houston-1, complete genome80.6464 %Subject ←→ Query30.815
NC_015276:632206Marinomonas mediterranea MMB-1 chromosome, complete genome75.7812 %Subject ←→ Query30.8175
NC_012846:1888000*Bartonella grahamii as4aup, complete genome81.1765 %Subject ←→ Query30.8764
NC_010161:205500Bartonella tribocorum CIP 105476, complete genome76.5748 %Subject ←→ Query31.0171
NC_015276:2769000Marinomonas mediterranea MMB-1 chromosome, complete genome77.7053 %Subject ←→ Query31.3112
NC_009654:2958316*Marinomonas sp. MWYL1, complete genome77.595 %Subject ←→ Query31.4845
NC_010161:1368500*Bartonella tribocorum CIP 105476, complete genome75.8272 %Subject ←→ Query31.6361
NC_010161:1501758*Bartonella tribocorum CIP 105476, complete genome79.3229 %Subject ←→ Query31.9674
NC_010161:1844452*Bartonella tribocorum CIP 105476, complete genome77.6716 %Subject ←→ Query32.1046
NC_008783:1101973*Bartonella bacilliformis KC583, complete genome78.8235 %Subject ←→ Query33.6628
NC_005955:1166521*Bartonella quintana str. Toulouse, complete genome80.8425 %Subject ←→ Query34.2164
NC_004556:531000*Xylella fastidiosa Temecula1, complete genome75.8885 %Subject Query43.2204
NC_010577:530917*Xylella fastidiosa M23, complete genome75.8854 %Subject Query44.2251