Pre_GI: OUP Neighbours

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Query: NC_010158:1 Yersinia pestis Angola plasmid pMT-pPCP, complete sequence

D: 35.0134

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated prior to 1985 and belongs to the antiqua biovar. It can ferment rhamnonse and melibiose which is a property usually associated with Yersinia pseudotuberculosis. Strain Angola belongs to a group of atypical Yersinia pestis strains with genotypic similarities that are intermediate between Y. pestis and Y. pseudotuberuclosis strains. Genotypic studies indicate that strain Angola is the oldest Y. pestis strain analyzed to date. It carries three plasmids that are similar to other Y. pestis plasmids but have aberrant sizes. The critical virulence factor, the V antigen, is different than that encoded by typical strains of Y. pestis and there is a deletion that affects the F1 operon. Strain Angola has been shown to be virulent by aerosol in mice.

Number of Neighbours: 39




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010498:1117938Escherichia coli SMS-3-5, complete genome75.6863 %Subject ←→ Query29.8896
NC_002655:1103991Escherichia coli O157:H7 EDL933, complete genome78.1556 %Subject ←→ Query31.019
NC_002695:1417912Escherichia coli O157:H7 str. Sakai, complete genome77.4724 %Subject ←→ Query31.3382
NC_010468:2265423*Escherichia coli ATCC 8739, complete genome75.9896 %Subject ←→ Query31.6845
NC_008253:3122148*Escherichia coli 536, complete genome75.4136 %Subject ←→ Query32.0871
NC_011750:3545466*Escherichia coli IAI39 chromosome, complete genome76.1091 %Subject ←→ Query32.5632
NC_008253:4735418Escherichia coli 536, complete genome76.4828 %Subject ←→ Query32.6562
NC_011750:4947500*Escherichia coli IAI39 chromosome, complete genome75.2298 %Subject ←→ Query32.9361
CP002516:2305659*Escherichia coli KO11, complete genome76.6942 %Subject ←→ Query33.0931
NC_010498:2278306Escherichia coli SMS-3-5, complete genome75.7782 %Subject ←→ Query34.2186
NC_008253:334467*Escherichia coli 536, complete genome76.4062 %Subject ←→ Query34.2564
NC_007946:4779745Escherichia coli UTI89, complete genome76.7678 %Subject ←→ Query34.3298
CU928145:1408280*Escherichia coli 55989 chromosome, complete genome75.671 %Subject ←→ Query34.5817
NC_011748:1408280*Escherichia coli 55989, complete genome75.671 %Subject ←→ Query34.5817
NC_000913:1625500*Escherichia coli K12, complete genome75.5852 %Subject ←→ Query34.6375
NC_013421:701005Pectobacterium wasabiae WPP163, complete genome75.6863 %Subject ←→ Query35.2447
NC_010488:48868Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence75.1746 %Subject ←→ Query35.6499
NC_011750:4775770Escherichia coli IAI39 chromosome, complete genome75.0031 %Subject ←→ Query35.7604
NC_011083:4547825Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.5331 %Subject ←→ Query36.0169
NC_011751:1859606Escherichia coli UMN026 chromosome, complete genome75.1716 %Subject ←→ Query36.2006
NC_008563:3332114Escherichia coli APEC O1, complete genome79.0748 %Subject ←→ Query36.3496
NC_008253:3941938*Escherichia coli 536, complete genome78.2812 %Subject ←→ Query36.7085
CP002797:4775780Escherichia coli NA114, complete genome75.0766 %Subject ←→ Query37.0319
NC_002655:1448605Escherichia coli O157:H7 EDL933, complete genome75.7537 %Subject ←→ Query37.1546
NC_004431:1166568Escherichia coli CFT073, complete genome75.6771 %Subject ←→ Query37.2232
NC_004431:3409389*Escherichia coli CFT073, complete genome76.1121 %Subject ←→ Query37.4762
NC_002695:1364833Escherichia coli O157:H7 str. Sakai, complete genome75.6679 %Subject ←→ Query37.7023
NC_002655:1053082Escherichia coli O157:H7 EDL933, complete genome75.6311 %Subject ←→ Query37.8144
AP010958:3853082*Escherichia coli O103:H2 str. 12009 DNA, complete genome76.973 %Subject ←→ Query37.9582
NC_002655:3919545Escherichia coli O157:H7 EDL933, complete genome76.2469 %Subject ←→ Query39.1881
NC_002695:3852233Escherichia coli O157:H7 str. Sakai, complete genome76.1029 %Subject ←→ Query40.3549
NC_009790:42112Escherichia coli E24377A plasmid pETEC_74, complete sequence76.0202 %Subject ←→ Query42.3754
NC_011748:3360967*Escherichia coli 55989, complete genome75.8088 %Subject ←→ Query42.7659
CU928145:3360967*Escherichia coli 55989 chromosome, complete genome75.8088 %Subject ←→ Query42.7659
AP010958:5090696*Escherichia coli O103:H2 str. 12009 DNA, complete genome78.5202 %Subject ←→ Query42.8493
AP010958:3627355Escherichia coli O103:H2 str. 12009 DNA, complete genome79.3842 %Subject ←→ Query43.1575
NC_008120:62000Yersinia pestis Antiqua plasmid pMT, complete sequence75.1961 %Subject ←→ Query43.4078
NC_013716:3327881Citrobacter rodentium ICC168, complete genome76.0417 %Subject ←→ Query44.6889
NC_010660:86445Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence75.2696 %Subject Query45.1069