Pre_GI: OUP Neighbours

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Query: NC_010067:4149298 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

D: 39.9988

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

Number of Neighbours: 176




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
AC_000091:4569379Escherichia coli W3110 DNA, complete genome75.1287 %Subject Query26.3771
NC_010473:4564590*Escherichia coli str. K-12 substr. DH10B, complete genome75.0674 %Subject Query26.5716
NC_007384:3897000Shigella sonnei Ss046, complete genome75.5208 %Subject Query27.7906
NC_000913:4462782*Escherichia coli K12, complete genome75.0674 %Subject Query27.9578
NC_007613:4217557*Shigella boydii Sb227, complete genome77.3315 %Subject Query28.4055
AC_000091:4472000*Escherichia coli W3110 DNA, complete genome75.0643 %Subject Query28.4715
NC_000913:3176000*Escherichia coli K12, complete genome75.0919 %Subject Query28.5597
NC_007613:3470314Shigella boydii Sb227, complete genome77.1446 %Subject Query28.5683
NC_008563:3888232*Escherichia coli APEC O1, complete genome75.9161 %Subject Query28.7026
NC_011750:3683760Escherichia coli IAI39 chromosome, complete genome75.2267 %Subject Query28.8211
NC_009792:3225965Citrobacter koseri ATCC BAA-895, complete genome75.8732 %Subject Query28.8971
NC_000913:3624826*Escherichia coli K12, complete genome76.3909 %Subject Query29.3169
NC_011740:448000*Escherichia fergusonii ATCC 35469, complete genome75.095 %Subject Query29.3592
NC_010473:3722571Escherichia coli str. K-12 substr. DH10B, complete genome77.3529 %Subject Query29.369
NC_000913:2873443Escherichia coli K12, complete genome75.098 %Subject Query29.4504
NC_006511:2718401Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.3051 %Subject Query29.5629
NC_010473:3273882*Escherichia coli str. K-12 substr. DH10B, complete genome75.1072 %Subject Query29.5811
NC_009800:2049346Escherichia coli HS, complete genome75.2819 %Subject Query29.8169
AC_000091:1521976Escherichia coli W3110 DNA, complete genome75.5668 %Subject Query29.8456
NC_008258:1784637Shigella flexneri 5 str. 8401, complete genome75.2757 %Subject Query29.9906
NC_011149:1035990*Salmonella enterica subsp. enterica serovar Agona str. SL483,76.2592 %Subject ←→ Query30.0401
NC_011080:819103*Salmonella enterica subsp. enterica serovar Newport str. SL254,75.2574 %Subject ←→ Query30.0888
NC_013956:455000Pantoea ananatis LMG 20103 chromosome, complete genome75.5423 %Subject ←→ Query30.2043
NC_003197:2720726Salmonella typhimurium LT2, complete genome75.2696 %Subject ←→ Query30.2164
NC_010694:63654*Erwinia tasmaniensis, complete genome75.5974 %Subject ←→ Query30.3198
NC_006511:1808815*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.9988 %Subject ←→ Query30.3411
NC_006905:1766000Salmonella enterica subsp. enterica serovar Choleraesuis str76.6759 %Subject ←→ Query30.3928
NC_008563:1577879Escherichia coli APEC O1, complete genome75.72 %Subject ←→ Query30.4232
NC_006511:1243817Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.2837 %Subject ←→ Query30.4657
CP002185:3822470Escherichia coli W, complete genome76.9026 %Subject ←→ Query30.5172
NC_010468:4059436Escherichia coli ATCC 8739, complete genome75.0123 %Subject ←→ Query30.6177
NC_010473:1607646Escherichia coli str. K-12 substr. DH10B, complete genome75.8241 %Subject ←→ Query30.6542
NC_008253:149693*Escherichia coli 536, complete genome75.818 %Subject ←→ Query30.7393
NC_010102:1703172Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,77.019 %Subject ←→ Query30.7419
NC_010102:25893Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,76.5502 %Subject ←→ Query30.8427
NC_003198:1378457Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.3278 %Subject ←→ Query30.9035
NC_010694:1966676Erwinia tasmaniensis, complete genome75.098 %Subject ←→ Query30.9971
NC_012214:1974500Erwinia pyrifoliae Ep1/96, complete genome76.9669 %Subject ←→ Query31.0374
NC_003198:1336894Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.0551 %Subject ←→ Query31.0494
NC_010468:694943Escherichia coli ATCC 8739, complete genome76.3327 %Subject ←→ Query31.095
NC_000913:1517051Escherichia coli K12, complete genome75.8241 %Subject ←→ Query31.1284
NC_003198:3881221*Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.1348 %Subject ←→ Query31.2529
NC_010498:3838419Escherichia coli SMS-3-5, complete genome76.2745 %Subject ←→ Query31.2873
NC_007946:1586656Escherichia coli UTI89, complete genome75.9651 %Subject ←→ Query31.3777
NC_011080:4177443*Salmonella enterica subsp. enterica serovar Newport str. SL254,77.0374 %Subject ←→ Query31.4081
NC_011751:4074586Escherichia coli UMN026 chromosome, complete genome76.2561 %Subject ←→ Query31.5236
NC_011080:2897977Salmonella enterica subsp. enterica serovar Newport str. SL254,77.8156 %Subject ←→ Query31.6261
NC_004631:1881214*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete76.4859 %Subject ←→ Query31.633
NC_006905:3717306Salmonella enterica subsp. enterica serovar Choleraesuis str75.0705 %Subject ←→ Query31.7181
NC_003197:4551880Salmonella typhimurium LT2, complete genome76.2194 %Subject ←→ Query31.7577
NC_006511:1273162Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.576 %Subject ←→ Query31.7972
NC_007946:3855445*Escherichia coli UTI89, complete genome75.8364 %Subject ←→ Query31.8945
NC_003197:1753663Salmonella typhimurium LT2, complete genome76.0601 %Subject ←→ Query31.9188
NC_011083:1408202*Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.9344 %Subject ←→ Query31.9218
NC_007946:149733*Escherichia coli UTI89, complete genome75.0031 %Subject ←→ Query32.0221
NC_015663:2807574*Enterobacter aerogenes KCTC 2190 chromosome, complete genome75.4167 %Subject ←→ Query32.1354
NC_000913:4528278Escherichia coli K12, complete genome75.8149 %Subject ←→ Query32.1698
NC_010067:1414000Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete75.2911 %Subject ←→ Query32.2836
NC_003198:1693623*Salmonella enterica subsp. enterica serovar Typhi str. CT18,77.2641 %Subject ←→ Query32.2934
NC_010102:1979742*Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,76.4675 %Subject ←→ Query32.4082
NC_006905:3780000*Salmonella enterica subsp. enterica serovar Choleraesuis str75.7138 %Subject ←→ Query32.4477
NC_006905:1961774*Salmonella enterica subsp. enterica serovar Choleraesuis str76.345 %Subject ←→ Query32.4839
NC_011083:3009760Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.1501 %Subject ←→ Query32.5166
AC_000091:4534935Escherichia coli W3110 DNA, complete genome75.8149 %Subject ←→ Query32.5188
NC_006511:1770000*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.3634 %Subject ←→ Query32.6757
NC_011080:1750000Salmonella enterica subsp. enterica serovar Newport str. SL254,76.4491 %Subject ←→ Query32.7031
NC_006511:1579776*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC77.1722 %Subject ←→ Query32.7578
NC_011083:1173802*Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.769 %Subject ←→ Query32.7882
NC_004631:1271500*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete76.1458 %Subject ←→ Query32.8332
NC_009792:1345500Citrobacter koseri ATCC BAA-895, complete genome75.9038 %Subject ←→ Query32.9065
NC_006511:1506915*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.2531 %Subject ←→ Query32.9115
NC_010067:1300606*Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete76.3879 %Subject ←→ Query32.9721
NC_013716:4885776*Citrobacter rodentium ICC168, complete genome76.5809 %Subject ←→ Query32.992
NC_010468:231000Escherichia coli ATCC 8739, complete genome77.0006 %Subject ←→ Query33.0413
NC_004631:1623511Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.7659 %Subject ←→ Query33.1104
NC_003197:1207597Salmonella typhimurium LT2, complete genome75.3493 %Subject ←→ Query33.137
NC_003198:1078113*Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.777 %Subject ←→ Query33.1464
NC_014121:1848971*Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete75.049 %Subject ←→ Query33.1955
NC_013716:2898434Citrobacter rodentium ICC168, complete genome77.5031 %Subject ←→ Query33.2381
NC_004431:1713141Escherichia coli CFT073, complete genome76.6299 %Subject ←→ Query33.265
NC_003198:1117687*Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.1226 %Subject ←→ Query33.273
NC_004631:1842050*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.9252 %Subject ←→ Query33.2852
NC_003197:1401603*Salmonella typhimurium LT2, complete genome76.6268 %Subject ←→ Query33.3769
NC_010102:1616530Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,76.2592 %Subject ←→ Query33.4701
NC_011080:1209935Salmonella enterica subsp. enterica serovar Newport str. SL254,76.057 %Subject ←→ Query33.6211
NC_006905:2857699Salmonella enterica subsp. enterica serovar Choleraesuis str76.97 %Subject ←→ Query33.7406
AP010958:3787991Escherichia coli O103:H2 str. 12009 DNA, complete genome75.8119 %Subject ←→ Query33.8977
NC_006905:1186895*Salmonella enterica subsp. enterica serovar Choleraesuis str75.8487 %Subject ←→ Query33.9119
NC_011080:1470794Salmonella enterica subsp. enterica serovar Newport str. SL254,75.0092 %Subject ←→ Query34.1341
NC_004631:531254Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.6587 %Subject ←→ Query34.1678
CP002516:246767Escherichia coli KO11, complete genome75.5729 %Subject ←→ Query34.1831
NC_011750:2928990*Escherichia coli IAI39 chromosome, complete genome76.0539 %Subject ←→ Query34.2283
NC_011748:299080Escherichia coli 55989, complete genome75.8915 %Subject ←→ Query34.2296
CU928145:299080Escherichia coli 55989 chromosome, complete genome75.8915 %Subject ←→ Query34.2296
NC_004431:153907*Escherichia coli CFT073, complete genome75.3094 %Subject ←→ Query34.2595
NC_010694:891967Erwinia tasmaniensis, complete genome75.72 %Subject ←→ Query34.4727
NC_006905:4486433*Salmonella enterica subsp. enterica serovar Choleraesuis str76.5135 %Subject ←→ Query34.5002
NC_008253:257059Escherichia coli 536, complete genome76.1795 %Subject ←→ Query34.548
NC_007384:2933625*Shigella sonnei Ss046, complete genome75.9681 %Subject ←→ Query34.6303
NC_003197:3005842*Salmonella typhimurium LT2, complete genome76.7616 %Subject ←→ Query34.6485
NC_006511:2819128Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.826 %Subject ←→ Query34.6701
NC_008563:258725*Escherichia coli APEC O1, complete genome75.8701 %Subject ←→ Query34.7956
NC_006511:529424*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.6281 %Subject ←→ Query34.9951
CP002185:3627992*Escherichia coli W, complete genome78.7623 %Subject ←→ Query35.0316
NC_003198:2453074*Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.4596 %Subject ←→ Query35.0382
NC_015663:4906652*Enterobacter aerogenes KCTC 2190 chromosome, complete genome77.5551 %Subject ←→ Query35.102
NC_011149:2912219Salmonella enterica subsp. enterica serovar Agona str. SL483,76.3848 %Subject ←→ Query35.1509
NC_011080:2982346Salmonella enterica subsp. enterica serovar Newport str. SL254,76.4645 %Subject ←→ Query35.1591
NC_010102:2967464Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,76.7157 %Subject ←→ Query35.1887
NC_003198:2856596Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.8107 %Subject ←→ Query35.2156
NC_004631:2842453Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.9712 %Subject ←→ Query35.3339
NC_007946:258747Escherichia coli UTI89, complete genome75.8609 %Subject ←→ Query35.3594
NC_013592:446092*Dickeya dadantii Ech586, complete genome75.5668 %Subject ←→ Query35.3721
NC_011149:1429523*Salmonella enterica subsp. enterica serovar Agona str. SL483,77.1936 %Subject ←→ Query35.6219
NC_013850:2182337Klebsiella variicola At-22 chromosome, complete genome75.6127 %Subject ←→ Query35.6776
NC_011083:2847318*Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,76.2929 %Subject ←→ Query36.0789
NC_010102:2178594Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.3983 %Subject ←→ Query36.1371
NC_009792:4658909Citrobacter koseri ATCC BAA-895, complete genome76.5809 %Subject ←→ Query36.1816
NC_011083:403022Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.7966 %Subject ←→ Query36.2337
NC_012912:1701231*Dickeya zeae Ech1591, complete genome75.8578 %Subject ←→ Query36.2459
NC_003198:1867456Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.8824 %Subject ←→ Query36.3276
NC_009792:642881Citrobacter koseri ATCC BAA-895, complete genome77.1477 %Subject ←→ Query36.3372
NC_011149:2829811Salmonella enterica subsp. enterica serovar Agona str. SL483,77.7696 %Subject ←→ Query36.3404
NC_011080:4543000Salmonella enterica subsp. enterica serovar Newport str. SL254,76.1489 %Subject ←→ Query36.4002
NC_015968:3023048Enterobacter asburiae LF7a chromosome, complete genome76.3021 %Subject ←→ Query36.6443
NC_014121:1682638Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete75.9038 %Subject ←→ Query36.6963
NC_004547:442927*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.095 %Subject ←→ Query36.7787
CU928160:2818750*Escherichia coli IAI1 chromosome, complete genome75.527 %Subject ←→ Query36.8055
NC_012214:897206Erwinia pyrifoliae Ep1/96, complete genome75.2604 %Subject ←→ Query36.8142
NC_004741:4160500Shigella flexneri 2a str. 2457T, complete genome76.4277 %Subject ←→ Query36.8785
NC_010102:2721374Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,76.0049 %Subject ←→ Query36.9753
NC_003197:1945858*Salmonella typhimurium LT2, complete genome75.2298 %Subject ←→ Query37.0227
NC_006905:946418Salmonella enterica subsp. enterica serovar Choleraesuis str76.6912 %Subject ←→ Query37.1682
NC_011083:967260Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,76.3848 %Subject ←→ Query37.3494
NC_003197:2894344*Salmonella typhimurium LT2, complete genome76.731 %Subject ←→ Query37.3993
NC_003197:920000Salmonella typhimurium LT2, complete genome77.0925 %Subject ←→ Query37.4914
NC_011080:1709612Salmonella enterica subsp. enterica serovar Newport str. SL254,76.4951 %Subject ←→ Query37.5912
NC_011149:1870931*Salmonella enterica subsp. enterica serovar Agona str. SL483,75.3799 %Subject ←→ Query37.6649
NC_010102:3851500Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,76.1489 %Subject ←→ Query37.6976
NC_010102:1388344Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.8915 %Subject ←→ Query37.7443
NC_011083:1761352Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,76.5288 %Subject ←→ Query37.8869
NC_003197:1713259Salmonella typhimurium LT2, complete genome75.6679 %Subject ←→ Query37.9967
NC_011149:3822000*Salmonella enterica subsp. enterica serovar Agona str. SL483,75.4963 %Subject ←→ Query38.1335
NC_010067:84093Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete75.095 %Subject ←→ Query38.1438
NC_009778:259241*Enterobacter sakazakii ATCC BAA-894, complete genome76.2561 %Subject ←→ Query38.1682
NC_006905:1726416Salmonella enterica subsp. enterica serovar Choleraesuis str76.4583 %Subject ←→ Query38.2121
NC_014121:4299500*Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete75.095 %Subject ←→ Query38.2902
NC_011751:1714131Escherichia coli UMN026 chromosome, complete genome75.3799 %Subject ←→ Query38.5539
NC_003197:3902500*Salmonella typhimurium LT2, complete genome75.4933 %Subject ←→ Query38.7315
NC_014121:4043198Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete75.1777 %Subject ←→ Query38.7902
NC_011083:2542876Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,77.4326 %Subject ←→ Query38.8327
NC_006905:3845000*Salmonella enterica subsp. enterica serovar Choleraesuis str75.8149 %Subject ←→ Query38.9413
NC_006511:3690828*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.0214 %Subject ←→ Query38.957
NC_012912:4012112*Dickeya zeae Ech1591, complete genome75.3799 %Subject ←→ Query38.9636
NC_011149:2701916*Salmonella enterica subsp. enterica serovar Agona str. SL483,79.9816 %Subject ←→ Query39.0747
NC_011080:1166951Salmonella enterica subsp. enterica serovar Newport str. SL254,75.2849 %Subject ←→ Query39.1039
NC_008253:1938975*Escherichia coli 536, complete genome75.2604 %Subject ←→ Query39.1316
NC_011083:3915500*Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.6863 %Subject ←→ Query39.3178
NC_004431:2185750*Escherichia coli CFT073, complete genome75.4657 %Subject ←→ Query39.4832
NC_014121:2514544*Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete76.6789 %Subject ←→ Query39.5974
NC_014121:3553809Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete75.3064 %Subject ←→ Query40.1056
NC_009832:426993*Serratia proteamaculans 568, complete genome75.9406 %Subject ←→ Query40.3702
NC_011080:3875320*Salmonella enterica subsp. enterica serovar Newport str. SL254,75.7476 %Subject ←→ Query40.3818
NC_013592:804288Dickeya dadantii Ech586, complete genome75.0184 %Subject ←→ Query41.0498
NC_014121:1101093*Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete76.2316 %Subject ←→ Query41.6478
NC_003198:1771432*Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.3572 %Subject ←→ Query41.7074
NC_004631:799810Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.8364 %Subject ←→ Query41.7303
NC_010102:2322866Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.5637 %Subject ←→ Query41.9292
NC_009778:1956225Enterobacter sakazakii ATCC BAA-894, complete genome75.2053 %Subject ←→ Query42.0217
NC_015663:2694373*Enterobacter aerogenes KCTC 2190 chromosome, complete genome75.0214 %Subject ←→ Query42.4486
NC_013716:1178383*Citrobacter rodentium ICC168, complete genome76.0876 %Subject ←→ Query42.529
NC_006511:792543Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.9896 %Subject ←→ Query42.5365
NC_013716:1138441*Citrobacter rodentium ICC168, complete genome76.6085 %Subject ←→ Query43.1029
NC_013716:4408201Citrobacter rodentium ICC168, complete genome75.0123 %Subject ←→ Query43.4284
NC_006905:2235607Salmonella enterica subsp. enterica serovar Choleraesuis str75.6618 %Subject ←→ Query43.4959
NC_014121:1589389*Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete75.3033 %Subject Query50.627