Pre_GI: OUP Neighbours

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Query: NC_009801:3374501 Escherichia coli E24377A, complete genome

D: 36.3653

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: ETEC is the leading cause of traveler's diarrhea, characterized by a large volume of watery diarrhea. ETEC primarily colonizes the small intestine by way of the pili. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Number of Neighbours: 17




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_008563:3119284Escherichia coli APEC O1, complete genome76.4737 %Subject ←→ Query31.9127
CU928160:256932Escherichia coli IAI1 chromosome, complete genome76.4185 %Subject ←→ Query34.5956
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence83.606 %Subject ←→ Query36.3239
NC_004431:1352906Escherichia coli CFT073, complete genome78.6857 %Subject ←→ Query36.4239
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome78.1924 %Subject ←→ Query36.4725
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome79.7396 %Subject ←→ Query36.7127
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome77.9504 %Subject ←→ Query36.813
NC_010660:33109Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence76.1366 %Subject ←→ Query36.8677
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome75.8548 %Subject ←→ Query37.275
NC_014228:2270000Xenorhabdus nematophila ATCC 19061, complete genome75.193 %Subject ←→ Query37.3838
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.3615 %Subject ←→ Query37.4593
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome76.829 %Subject ←→ Query37.6581
NC_007385:157516Shigella sonnei Ss046 plasmid pSS_046, complete sequence80.7659 %Subject ←→ Query38.0958
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome80.1134 %Subject ←→ Query38.4667
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome77.3376 %Subject ←→ Query38.6045
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome75.2727 %Subject ←→ Query39.836
NC_010660:175200*Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence83.7255 %Subject ←→ Query46.3542