Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_009698:38000 Clostridium botulinum A str. Hall chromosome, complete genome

D: 21.6343

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_009697:38000*Clostridium botulinum A str. ATCC 19397 chromosome, completeSubject ←→ Query21.0567
NC_009698:38000*Clostridium botulinum A str. Hall chromosome, complete genomeSubject ←→ Query21.6343
NC_016630:1462788*Filifactor alocis ATCC 35896 chromosome, complete genomeSubject ←→ Query21.9449
NC_009495:38000*Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeSubject ←→ Query22.2594
NC_009699:33452*Clostridium botulinum F str. Langeland chromosome, complete genomeSubject ←→ Query22.2813
NC_017297:33519*Clostridium botulinum F str. 230613 chromosome, complete genomeSubject ←→ Query22.8712
NC_012658:3827500*Clostridium botulinum Ba4 str. 657 chromosome, complete genomeSubject ←→ Query23.0069
NC_015425:2690448*Clostridium botulinum BKT015925 chromosome, complete genomeSubject ←→ Query23.0814
NC_017208:256163*Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeSubject ←→ Query23.5449
NC_017200:4697500*Bacillus thuringiensis serovar finitimus YBT-020 chromosome,Subject ←→ Query23.7293
NC_011725:4870223Bacillus cereus B4264 chromosome, complete genomeSubject ←→ Query24.9713
NC_010321:429720*Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeSubject ←→ Query25.0465
NC_012658:35500*Clostridium botulinum Ba4 str. 657 chromosome, complete genomeSubject ←→ Query25.1205
NC_016627:4490435*Clostridium clariflavum DSM 19732 chromosome, complete genomeSubject ←→ Query25.3329
NC_003030:155554*Clostridium acetobutylicum ATCC 824, complete genomeSubject ←→ Query25.4651
NC_015687:155554*Clostridium acetobutylicum DSM 1731 chromosome, complete genomeSubject ←→ Query25.4773
NC_017208:1*Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeSubject ←→ Query25.5432
NC_010320:918532*Thermoanaerobacter sp. X514 chromosome, complete genomeSubject ←→ Query25.9351
NC_018664:985689*Clostridium acidurici 9a chromosome, complete genomeSubject ←→ Query25.959
NC_006449:121462*Streptococcus thermophilus CNRZ1066, complete genomeSubject ←→ Query26.1732
NC_006448:121435*Streptococcus thermophilus LMG 18311, complete genomeSubject ←→ Query26.597
NC_011184:2840713*Vibrio fischeri MJ11 chromosome I, complete sequenceSubject ←→ Query27.0599
NC_009706:3845039*Clostridium kluyveri DSM 555 chromosome, complete genomeSubject ←→ Query27.6281
NC_017208:64500*Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeSubject ←→ Query27.6621
NC_011837:3776541Clostridium kluyveri NBRC 12016, complete genomeSubject ←→ Query27.884
NC_010321:2256758Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeSubject ←→ Query28.01
NC_014171:1*Bacillus thuringiensis BMB171 chromosome, complete genomeSubject ←→ Query28.4052
NC_017316:203233*Enterococcus faecalis OG1RF chromosome, complete genomeSubject ←→ Query28.5622
NC_009922:2590317*Alkaliphilus oremlandii OhILAs, complete genomeSubject ←→ Query28.7836
NC_010320:33814*Thermoanaerobacter sp. X514 chromosome, complete genomeSubject ←→ Query29.5127
NC_017208:516127*Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeSubject ←→ Query29.7645
NC_014171:521996*Bacillus thuringiensis BMB171 chromosome, complete genomeSubject ←→ Query30.1532
NC_018664:3009166*Clostridium acidurici 9a chromosome, complete genomeSubject ←→ Query30.2312
NC_016584:85543*Desulfosporosinus orientis DSM 765 chromosome, complete genomeSubject ←→ Query31.2553
NC_018704:81733*Amphibacillus xylanus NBRC 15112, complete genomeSubject ←→ Query31.3096
NC_014614:554949*Clostridium sticklandii, complete genomeSubject Query31.7606
NC_014171:261952Bacillus thuringiensis BMB171 chromosome, complete genomeSubject Query32.2886
NC_007907:321537*Desulfitobacterium hafniense Y51, complete genomeSubject Query32.3832
NC_014171:235558*Bacillus thuringiensis BMB171 chromosome, complete genomeSubject Query34.2266
NC_015760:123929*Streptococcus salivarius CCHSS3, complete genomeSubject Query37.0106
NC_004193:79588*Oceanobacillus iheyensis HTE831, complete genomeSubject Query40.5153
NC_014171:71963*Bacillus thuringiensis BMB171 chromosome, complete genomeSubject Query40.659
NC_014551:157418*Bacillus amyloliquefaciens DSM 7, complete genomeSubject Query45.3