Pre_GI: OUP Neighbours

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Query: NC_009648:3476000 Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome

D: 37.4593

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a patient in 1994. Opportunistic pathogen that causes multiple hospital-acquired infections. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.

Number of Neighbours: 88




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence76.008 %Subject ←→ Query28.1767
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome78.5723 %Subject ←→ Query29.1646
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome76.7739 %Subject ←→ Query29.5112
NC_003143:4006884Yersinia pestis CO92, complete genome78.3915 %Subject ←→ Query29.6176
NC_008149:4053363Yersinia pestis Nepal516, complete genome76.3113 %Subject ←→ Query30.0006
NC_004088:266543Yersinia pestis KIM, complete genome76.1305 %Subject ←→ Query30.0081
NC_010694:962383Erwinia tasmaniensis, complete genome76.9301 %Subject ←→ Query30.0928
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome78.7776 %Subject ←→ Query30.1556
NC_010634:4234932Yersinia pseudotuberculosis PB1/+, complete genome78.3487 %Subject ←→ Query30.3016
NC_014500:2525880Dickeya dadantii 3937 chromosome, complete genome75.6158 %Subject ←→ Query30.3147
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence75.8609 %Subject ←→ Query31.1132
NC_015663:1902344*Enterobacter aerogenes KCTC 2190 chromosome, complete genome76.4828 %Subject ←→ Query31.1284
NC_008563:3119284Escherichia coli APEC O1, complete genome86.5104 %Subject ←→ Query31.9127
NC_014500:3519722Dickeya dadantii 3937 chromosome, complete genome75.098 %Subject ←→ Query32.164
NC_007384:1763375Shigella sonnei Ss046, complete genome79.5619 %Subject ←→ Query33.4012
NC_013592:2160000Dickeya dadantii Ech586, complete genome75.242 %Subject ←→ Query33.4874
NC_012912:2285778Dickeya zeae Ech1591, complete genome77.981 %Subject ←→ Query33.4887
NC_014562:1698253Pantoea vagans C9-1 chromosome, complete genome75.7567 %Subject ←→ Query33.9839
NC_004547:3817656Erwinia carotovora subsp. atroseptica SCRI1043, complete genome77.0527 %Subject ←→ Query34.15
CU928160:256932Escherichia coli IAI1 chromosome, complete genome78.4283 %Subject ←→ Query34.5956
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome81.4093 %Subject ←→ Query34.8158
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome80.1471 %Subject ←→ Query34.9445
NC_009792:808332Citrobacter koseri ATCC BAA-895, complete genome76.0325 %Subject ←→ Query35.0274
NC_010694:3055403Erwinia tasmaniensis, complete genome78.4038 %Subject ←→ Query35.0644
NC_006511:4119332*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.8487 %Subject ←→ Query35.1897
NC_003198:3824187Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.9455 %Subject ←→ Query35.4207
NC_016048:2243108Oscillibacter valericigenes Sjm18-20, complete genome75.0306 %Subject ←→ Query35.5727
NC_014305:126029Erwinia billingiae Eb661 plasmid pEB170, complete sequence75.2727 %Subject ←→ Query35.5879
NC_003198:3586000*Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.6391 %Subject ←→ Query35.6335
NC_010067:3753971Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.0987 %Subject ←→ Query35.7065
NC_006905:3942753Salmonella enterica subsp. enterica serovar Choleraesuis str76.5502 %Subject ←→ Query35.749
NC_010067:632683Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.5674 %Subject ←→ Query35.8098
NC_009832:1946401Serratia proteamaculans 568, complete genome77.2825 %Subject ←→ Query35.908
NC_012779:2424967*Edwardsiella ictaluri 93-146, complete genome75.1991 %Subject ←→ Query35.992
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete83.4283 %Subject ←→ Query36.1113
NC_004631:3809678Salmonella enterica subsp. enterica serovar Typhi Ty2, complete77.0067 %Subject ←→ Query36.1376
NC_013961:3083816Erwinia amylovora, complete genome79.1238 %Subject ←→ Query36.2172
NC_007608:97092Shigella boydii Sb227 plasmid pSB4_227, complete sequence75.9835 %Subject ←→ Query36.3239
NC_009801:3374501*Escherichia coli E24377A, complete genome75.3615 %Subject ←→ Query36.3653
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC79.5864 %Subject ←→ Query36.3874
NC_003197:4005857Salmonella typhimurium LT2, complete genome76.008 %Subject ←→ Query36.3904
NC_004431:1352906Escherichia coli CFT073, complete genome80.3707 %Subject ←→ Query36.4239
NC_002695:2158314Escherichia coli O157:H7 str. Sakai, complete genome80.4534 %Subject ←→ Query36.4725
NC_011080:2789744*Salmonella enterica subsp. enterica serovar Newport str. SL254,76.7034 %Subject ←→ Query36.512
NC_011080:3976441Salmonella enterica subsp. enterica serovar Newport str. SL254,76.1857 %Subject ←→ Query36.5166
NC_007712:2287053Sodalis glossinidius str. 'morsitans', complete genome76.1152 %Subject ←→ Query36.533
NC_009648:3720000*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.25 %Subject ←→ Query36.7036
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome81.5717 %Subject ←→ Query36.7127
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome79.6906 %Subject ←→ Query36.813
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome75.2665 %Subject ←→ Query37.0151
NC_007712:433500Sodalis glossinidius str. 'morsitans', complete genome75.6648 %Subject ←→ Query37.0845
NC_003198:2297837Salmonella enterica subsp. enterica serovar Typhi str. CT18,82.6899 %Subject ←→ Query37.159
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome81.0263 %Subject ←→ Query37.275
NC_010102:3955479Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.2206 %Subject ←→ Query37.2943
NC_006511:3794017Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC75.3401 %Subject ←→ Query37.3602
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,82.5306 %Subject ←→ Query37.4165
NC_010694:2189652*Erwinia tasmaniensis, complete genome75.9589 %Subject ←→ Query37.4179
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str82.7574 %Subject ←→ Query37.6094
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome82.6501 %Subject ←→ Query37.6581
NC_011083:4020000Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,76.2745 %Subject ←→ Query37.6885
NC_012912:647369Dickeya zeae Ech1591, complete genome75.2175 %Subject ←→ Query37.7391
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,76.6452 %Subject ←→ Query37.9381
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,80.576 %Subject ←→ Query38.0253
NC_011149:3930358Salmonella enterica subsp. enterica serovar Agona str. SL483,75.8425 %Subject ←→ Query38.0507
NC_007385:157516Shigella sonnei Ss046 plasmid pSS_046, complete sequence79.2034 %Subject ←→ Query38.0958
NC_003198:2703013*Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.9914 %Subject ←→ Query38.1505
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome80.9344 %Subject ←→ Query38.2235
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome75.4289 %Subject ←→ Query38.2879
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome82.0619 %Subject ←→ Query38.4667
NC_011750:919953Escherichia coli IAI39 chromosome, complete genome78.9062 %Subject ←→ Query38.6045
NC_013282:1256769Cronobacter turicensis, complete genome78.7163 %Subject ←→ Query38.8742
NC_011750:2009889Escherichia coli IAI39 chromosome, complete genome78.8542 %Subject ←→ Query39.0625
NC_014228:2883500Xenorhabdus nematophila ATCC 19061, complete genome75.7812 %Subject ←→ Query39.0811
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome76.8597 %Subject ←→ Query39.7546
NC_012779:996879Edwardsiella ictaluri 93-146, complete genome75.5453 %Subject ←→ Query39.7678
NC_006905:2805877*Salmonella enterica subsp. enterica serovar Choleraesuis str76.921 %Subject ←→ Query39.786
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome79.9969 %Subject ←→ Query39.836
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome76.9792 %Subject ←→ Query40.1776
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete83.4191 %Subject ←→ Query40.59
NC_013592:1424560Dickeya dadantii Ech586, complete genome79.2218 %Subject ←→ Query41.2418
NC_013282:3216226*Cronobacter turicensis, complete genome76.6207 %Subject ←→ Query41.2788
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome77.3254 %Subject ←→ Query41.4806
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome77.3315 %Subject ←→ Query41.5453
NC_013283:113660Cronobacter turicensis plasmid pCTU1, complete sequence75.8517 %Subject ←→ Query42.151
NC_009778:3832000Enterobacter sakazakii ATCC BAA-894, complete genome77.5337 %Subject ←→ Query45.4902
NC_010660:175200*Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence76.3848 %Subject ←→ Query46.3542
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome81.8934 %Subject Query49.6231
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome81.8168 %Subject Query50.7802