Pre_GI: OUP Neighbours

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Query: NC_009648:293052 Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome

D: 43.5401

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a patient in 1994. Opportunistic pathogen that causes multiple hospital-acquired infections. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.

Number of Neighbours: 104




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome77.0987 %Subject ←→ Query38.2235
NC_013716:1756545*Citrobacter rodentium ICC168, complete genome79.7212 %Subject Query33.4286
NC_013283:113660Cronobacter turicensis plasmid pCTU1, complete sequence78.1618 %Subject ←→ Query42.151
NC_013282:3216226*Cronobacter turicensis, complete genome77.6317 %Subject ←→ Query41.2788
NC_013282:1256769Cronobacter turicensis, complete genome82.9626 %Subject ←→ Query38.8742
NC_013282:116649*Cronobacter turicensis, complete genome75.7138 %Subject ←→ Query33.8673
NC_013282:646569Cronobacter turicensis, complete genome80.3431 %Subject Query30.8062
NC_013282:3719500*Cronobacter turicensis, complete genome80.1348 %Subject Query31.6817
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome77.6072 %Subject ←→ Query37.8586
NC_014500:3519722Dickeya dadantii 3937 chromosome, complete genome80.4473 %Subject Query32.164
NC_014500:2934232*Dickeya dadantii 3937 chromosome, complete genome77.9933 %Subject ←→ Query37.5286
NC_014500:1646854*Dickeya dadantii 3937 chromosome, complete genome79.5312 %Subject ←→ Query37.9513
NC_012880:913698Dickeya dadantii Ech703, complete genome75.6342 %Subject Query30.49
NC_012880:3645304Dickeya dadantii Ech703, complete genome76.5135 %Subject Query33.3293
NC_012880:2778795Dickeya dadantii Ech703, complete genome78.9399 %Subject ←→ Query36.5333
NC_012912:2800884*Dickeya zeae Ech1591, complete genome75.8885 %Subject Query31.095
NC_012912:1229333Dickeya zeae Ech1591, complete genome75.9161 %Subject Query32.2592
NC_012912:777592*Dickeya zeae Ech1591, complete genome78.4498 %Subject ←→ Query33.9737
NC_012912:647369Dickeya zeae Ech1591, complete genome76.5594 %Subject ←→ Query37.7391
NC_012779:2664849Edwardsiella ictaluri 93-146, complete genome75.6618 %Subject ←→ Query33.7832
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome75.1838 %Subject ←→ Query38.2879
NC_012779:261438*Edwardsiella ictaluri 93-146, complete genome75.0031 %Subject ←→ Query37.9045
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome77.7328 %Subject ←→ Query34.9445
NC_012779:2424967*Edwardsiella ictaluri 93-146, complete genome78.6612 %Subject ←→ Query35.992
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome78.7224 %Subject ←→ Query39.7546
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome75.1256 %Subject ←→ Query37.0151
NC_012779:3016327Edwardsiella ictaluri 93-146, complete genome75.1287 %Subject ←→ Query37.6194
NC_012779:1449500*Edwardsiella ictaluri 93-146, complete genome78.4712 %Subject ←→ Query41.6091
NC_012779:2957000Edwardsiella ictaluri 93-146, complete genome75.3401 %Subject ←→ Query46.4521
NC_012779:2856051Edwardsiella ictaluri 93-146, complete genome77.1293 %Subject ←→ Query40.677
NC_012779:996879Edwardsiella ictaluri 93-146, complete genome76.2745 %Subject ←→ Query39.7678
NC_013508:1687432Edwardsiella tarda EIB202, complete genome75.8977 %Subject ←→ Query39.3906
NC_013508:1262333Edwardsiella tarda EIB202, complete genome76.4982 %Subject Query32.8692
NC_013508:876431*Edwardsiella tarda EIB202, complete genome78.3915 %Subject ←→ Query41.7282
NC_013508:3593000Edwardsiella tarda EIB202, complete genome76.5533 %Subject ←→ Query34.4706
NC_013508:2356865*Edwardsiella tarda EIB202, complete genome78.3058 %Subject ←→ Query44.5077
NC_013508:2130681*Edwardsiella tarda EIB202, complete genome80.1838 %Subject ←→ Query42.2435
NC_015663:770485*Enterobacter aerogenes KCTC 2190 chromosome, complete genome77.9197 %Subject ←→ Query39.8332
NC_015663:4447984Enterobacter aerogenes KCTC 2190 chromosome, complete genome81.6912 %Subject Query31.6444
NC_015663:1934863Enterobacter aerogenes KCTC 2190 chromosome, complete genome79.8468 %Subject Query30.6937
NC_015663:1902344*Enterobacter aerogenes KCTC 2190 chromosome, complete genome75.1348 %Subject Query31.1284
NC_015968:204969*Enterobacter asburiae LF7a chromosome, complete genome75.9926 %Subject Query30.2205
NC_015968:4389871Enterobacter asburiae LF7a chromosome, complete genome77.2917 %Subject Query30.7332
NC_009778:3832000Enterobacter sakazakii ATCC BAA-894, complete genome78.1464 %Subject ←→ Query45.4902
NC_009778:3454790Enterobacter sakazakii ATCC BAA-894, complete genome80.1654 %Subject ←→ Query36.7583
NC_009778:1902995Enterobacter sakazakii ATCC BAA-894, complete genome79.5496 %Subject ←→ Query35.1593
NC_009778:1556222Enterobacter sakazakii ATCC BAA-894, complete genome75.0766 %Subject ←→ Query44.4504
NC_009778:1141716Enterobacter sakazakii ATCC BAA-894, complete genome79.6691 %Subject ←→ Query48.5924
NC_013961:3083816Erwinia amylovora, complete genome76.6912 %Subject ←→ Query36.2172
NC_004547:138500Erwinia carotovora subsp. atroseptica SCRI1043, complete genome76.0049 %Subject ←→ Query36.6454
NC_010694:614985Erwinia tasmaniensis, complete genome80.2083 %Subject ←→ Query35.5876
NC_010694:3055403Erwinia tasmaniensis, complete genome76.106 %Subject ←→ Query35.0644
NC_010694:2189652*Erwinia tasmaniensis, complete genome76.1795 %Subject ←→ Query37.4179
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.4859 %Subject ←→ Query50.7802
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.9363 %Subject ←→ Query49.6231
NC_009648:3720000*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.0172 %Subject ←→ Query36.7036
NC_014562:1402863Pantoea vagans C9-1 chromosome, complete genome75.3186 %Subject ←→ Query35.29
NC_014562:1698253Pantoea vagans C9-1 chromosome, complete genome75.9712 %Subject ←→ Query33.9839
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence75.6219 %Subject Query28.1767
NC_012917:4646491Pectobacterium carotovorum subsp. carotovorum PC1, complete genome76.3787 %Subject Query32.6958
NC_012917:4328463Pectobacterium carotovorum subsp. carotovorum PC1, complete genome75.4442 %Subject Query31.405
NC_013421:1954915*Pectobacterium wasabiae WPP163, complete genome75.8456 %Subject Query32.6483
NC_010067:632683Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete78.5907 %Subject ←→ Query35.8098
NC_010067:3753971Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete77.8401 %Subject ←→ Query35.7065
NC_010067:171053Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete80.7016 %Subject Query31.5722
NC_011149:361765Salmonella enterica subsp. enterica serovar Agona str. SL483,80.9283 %Subject ←→ Query36.5643
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,75.6311 %Subject ←→ Query38.0253
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,78.9062 %Subject ←→ Query37.9381
NC_011149:3930358Salmonella enterica subsp. enterica serovar Agona str. SL483,77.3744 %Subject ←→ Query38.0507
NC_011149:3895921Salmonella enterica subsp. enterica serovar Agona str. SL483,76.6422 %Subject Query31.5601
NC_006905:2805877*Salmonella enterica subsp. enterica serovar Choleraesuis str76.9945 %Subject ←→ Query39.786
NC_006905:3942753Salmonella enterica subsp. enterica serovar Choleraesuis str79.4424 %Subject ←→ Query35.749
NC_011083:4020000Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,77.8493 %Subject ←→ Query37.6885
NC_011083:3985618Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,76.9179 %Subject Query32.4599
NC_011080:3941909Salmonella enterica subsp. enterica serovar Newport str. SL254,77.0006 %Subject ←→ Query39.4334
NC_011080:383441Salmonella enterica subsp. enterica serovar Newport str. SL254,81.106 %Subject ←→ Query37.0114
NC_011080:2789744*Salmonella enterica subsp. enterica serovar Newport str. SL254,76.1826 %Subject ←→ Query36.512
NC_011080:3976441Salmonella enterica subsp. enterica serovar Newport str. SL254,77.4847 %Subject ←→ Query36.5166
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC78.0729 %Subject ←→ Query36.3874
NC_006511:3794017Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.5043 %Subject ←→ Query37.3602
NC_006511:3759550Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC77.9504 %Subject Query31.1345
NC_006511:3364448*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC79.1636 %Subject ←→ Query38.4606
NC_010102:3919999Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,77.4081 %Subject Query32.0708
NC_010102:2881714Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,81.9822 %Subject Query32.0373
NC_010102:283364*Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,78.0453 %Subject ←→ Query33.8947
NC_010102:3955479Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,78.1618 %Subject ←→ Query37.2943
NC_003198:3855157Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.2316 %Subject Query32.5632
NC_003198:3824187Salmonella enterica subsp. enterica serovar Typhi str. CT18,77.4479 %Subject ←→ Query35.4207
NC_003198:2769449Salmonella enterica subsp. enterica serovar Typhi str. CT18,81.2194 %Subject Query31.0494
NC_003198:2703013*Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.4154 %Subject ←→ Query38.1505
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.1134 %Subject ←→ Query36.1113
NC_004631:3841975Salmonella enterica subsp. enterica serovar Typhi Ty2, complete76.9026 %Subject Query32.0647
NC_004631:3809678Salmonella enterica subsp. enterica serovar Typhi Ty2, complete77.5276 %Subject ←→ Query36.1376
NC_004631:283289*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete76.4032 %Subject Query31.6756
NC_004631:2755306Salmonella enterica subsp. enterica serovar Typhi Ty2, complete81.2194 %Subject Query30.7575
NC_003197:4005857Salmonella typhimurium LT2, complete genome77.4786 %Subject ←→ Query36.3904
NC_003197:3971905Salmonella typhimurium LT2, complete genome76.9761 %Subject Query32.0829
NC_007712:433500Sodalis glossinidius str. 'morsitans', complete genome80.3891 %Subject ←→ Query37.0845
NC_007712:2287053Sodalis glossinidius str. 'morsitans', complete genome76.9118 %Subject ←→ Query36.533
NC_007712:1893066*Sodalis glossinidius str. 'morsitans', complete genome78.4988 %Subject Query32.276
NC_008150:1420825*Yersinia pestis Antiqua, complete genome78.0178 %Subject ←→ Query37.0184
NC_005810:1794490*Yersinia pestis biovar Microtus str. 91001, complete genome77.981 %Subject ←→ Query37.035
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome75.6036 %Subject Query29.5112
NC_003143:2137945*Yersinia pestis CO92, complete genome77.8217 %Subject ←→ Query37.3318