Pre_GI: OUP Neighbours

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Query: NC_009648:1487692 Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome

D: 49.6231

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a patient in 1994. Opportunistic pathogen that causes multiple hospital-acquired infections. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.

Number of Neighbours: 106




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome85.0214 %Subject ←→ Query50.7802
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome82.0833 %Subject Query34.8158
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome81.8934 %Subject Query37.4593
NC_010694:3055403Erwinia tasmaniensis, complete genome81.7678 %Subject Query35.0644
NC_013961:3083816Erwinia amylovora, complete genome81.5625 %Subject Query36.2172
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete80.9926 %Subject ←→ Query40.59
NC_013282:1256769Cronobacter turicensis, complete genome80.9589 %Subject Query38.8742
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome80.8732 %Subject ←→ Query39.7546
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome80.867 %Subject Query38.2235
NC_008563:3119284Escherichia coli APEC O1, complete genome80.7138 %Subject Query31.9127
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome80.1226 %Subject Query34.9445
NC_013283:113660Cronobacter turicensis plasmid pCTU1, complete sequence80.098 %Subject ←→ Query42.151
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete79.6354 %Subject Query36.1113
NC_012779:1449500*Edwardsiella ictaluri 93-146, complete genome79.5435 %Subject ←→ Query41.6091
NC_014562:1698253Pantoea vagans C9-1 chromosome, complete genome79.4884 %Subject Query33.9839
NC_009832:1946401Serratia proteamaculans 568, complete genome79.0901 %Subject Query35.908
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome79.0472 %Subject ←→ Query39.836
NC_007712:433500Sodalis glossinidius str. 'morsitans', complete genome78.7592 %Subject Query37.0845
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str78.5662 %Subject Query37.6094
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,78.511 %Subject Query37.4165
NC_012779:996879Edwardsiella ictaluri 93-146, complete genome78.511 %Subject ←→ Query39.7678
NC_003198:2297837Salmonella enterica subsp. enterica serovar Typhi str. CT18,78.3885 %Subject Query37.159
NC_007712:1893066*Sodalis glossinidius str. 'morsitans', complete genome78.223 %Subject Query32.276
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC78.1587 %Subject Query36.3874
NC_012779:2424967*Edwardsiella ictaluri 93-146, complete genome78.1403 %Subject Query35.992
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome78.0239 %Subject Query36.7127
NC_009778:3832000Enterobacter sakazakii ATCC BAA-894, complete genome77.9565 %Subject ←→ Query45.4902
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome77.9259 %Subject Query37.0151
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome77.8278 %Subject Query30.1556
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome77.7972 %Subject ←→ Query41.4806
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome77.7574 %Subject ←→ Query40.1776
NC_013592:1424560Dickeya dadantii Ech586, complete genome77.7451 %Subject ←→ Query41.2418
NC_009648:3720000*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome77.6777 %Subject Query36.7036
NC_010694:614985Erwinia tasmaniensis, complete genome77.6593 %Subject Query35.5876
NC_015663:1902344*Enterobacter aerogenes KCTC 2190 chromosome, complete genome77.6471 %Subject Query31.1284
NC_007645:3870466Hahella chejuensis KCTC 2396, complete genome77.6379 %Subject ←→ Query41.4216
NC_003143:4006884Yersinia pestis CO92, complete genome77.6256 %Subject Query29.6176
NC_012779:2586175Edwardsiella ictaluri 93-146, complete genome77.5888 %Subject ←→ Query45.323
NC_013282:3216226*Cronobacter turicensis, complete genome77.5766 %Subject ←→ Query41.2788
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence77.5031 %Subject Query28.1767
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,77.5031 %Subject Query37.9381
NC_013282:646569Cronobacter turicensis, complete genome77.4939 %Subject Query30.8062
NC_007712:2287053Sodalis glossinidius str. 'morsitans', complete genome77.3836 %Subject Query36.533
NC_013508:1262333Edwardsiella tarda EIB202, complete genome77.3805 %Subject Query32.8692
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome77.3652 %Subject Query29.1646
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,77.3101 %Subject Query38.0253
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome77.2641 %Subject Query38.4667
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome77.2457 %Subject ←→ Query41.5453
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome77.2181 %Subject Query38.2879
NC_010634:4234932Yersinia pseudotuberculosis PB1/+, complete genome77.1906 %Subject Query30.3016
NC_014500:3519722Dickeya dadantii 3937 chromosome, complete genome77.163 %Subject Query32.164
NC_013282:3719500*Cronobacter turicensis, complete genome77.1017 %Subject Query31.6817
NC_012779:1939747Edwardsiella ictaluri 93-146, complete genome77.0987 %Subject Query34.6849
NC_013508:2356865*Edwardsiella tarda EIB202, complete genome77.0741 %Subject ←→ Query44.5077
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome76.9884 %Subject Query29.5112
NC_009648:293052*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.9363 %Subject ←→ Query43.5401
NC_009778:1141716Enterobacter sakazakii ATCC BAA-894, complete genome76.9363 %Subject ←→ Query48.5924
NC_012912:2285778Dickeya zeae Ech1591, complete genome76.9087 %Subject Query33.4887
NC_011750:2009889Escherichia coli IAI39 chromosome, complete genome76.8321 %Subject Query39.0625
NC_010067:632683Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete76.826 %Subject Query35.8098
NC_010694:2189652*Erwinia tasmaniensis, complete genome76.7923 %Subject Query37.4179
NC_015566:4662171Serratia sp. AS12 chromosome, complete genome76.6054 %Subject ←→ Query41.8855
NC_006905:2805877*Salmonella enterica subsp. enterica serovar Choleraesuis str76.5472 %Subject ←→ Query39.786
NC_003198:2703013*Salmonella enterica subsp. enterica serovar Typhi str. CT18,76.5441 %Subject Query38.1505
NC_008149:4053363Yersinia pestis Nepal516, complete genome76.5257 %Subject Query30.0006
NC_013716:1756545*Citrobacter rodentium ICC168, complete genome76.5165 %Subject Query33.4286
NC_010694:962383Erwinia tasmaniensis, complete genome76.489 %Subject Query30.0928
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome76.4859 %Subject Query37.8586
NC_013508:876431*Edwardsiella tarda EIB202, complete genome76.4062 %Subject ←→ Query41.7282
NC_011080:2789744*Salmonella enterica subsp. enterica serovar Newport str. SL254,76.3603 %Subject Query36.512
NC_004088:266543Yersinia pestis KIM, complete genome76.345 %Subject Query30.0081
NC_006905:3942753Salmonella enterica subsp. enterica serovar Choleraesuis str76.3419 %Subject Query35.749
NC_004431:1352906Escherichia coli CFT073, complete genome76.1857 %Subject Query36.4239
NC_003277:22257Salmonella typhimurium LT2 plasmid pSLT, complete sequence76.1612 %Subject Query31.1132
NC_013282:116649*Cronobacter turicensis, complete genome76.155 %Subject Query33.8673
NC_012779:2664849Edwardsiella ictaluri 93-146, complete genome76.0478 %Subject Query33.7832
NC_014305:126029Erwinia billingiae Eb661 plasmid pEB170, complete sequence75.9957 %Subject Query35.5879
NC_010067:3753971Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete75.8977 %Subject Query35.7065
NC_009832:358291Serratia proteamaculans 568, complete genome75.8425 %Subject Query31.5844
NC_014228:2883500Xenorhabdus nematophila ATCC 19061, complete genome75.8119 %Subject Query39.0811
NC_015663:4447984Enterobacter aerogenes KCTC 2190 chromosome, complete genome75.7537 %Subject Query31.6444
NC_009778:1902995Enterobacter sakazakii ATCC BAA-894, complete genome75.7016 %Subject Query35.1593
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome75.6219 %Subject Query37.275
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome75.6097 %Subject Query37.6581
NC_004631:3809678Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.5974 %Subject Query36.1376
NC_011751:1377457Escherichia coli UMN026 chromosome, complete genome75.5362 %Subject Query36.813
NC_003198:3824187Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.4749 %Subject Query35.4207
NC_011083:4020000Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,75.3922 %Subject Query37.6885
NC_010102:3955479Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,75.3738 %Subject Query37.2943
CU928160:256932Escherichia coli IAI1 chromosome, complete genome75.3462 %Subject Query34.5956
NC_007645:6991163Hahella chejuensis KCTC 2396, complete genome75.3339 %Subject Query38.1445
NC_014500:1646854*Dickeya dadantii 3937 chromosome, complete genome75.3278 %Subject Query37.9513
NC_014562:1883517*Pantoea vagans C9-1 chromosome, complete genome75.2757 %Subject Query34.2182
NC_005810:1794490*Yersinia pestis biovar Microtus str. 91001, complete genome75.2543 %Subject Query37.035
NC_013508:2130681*Edwardsiella tarda EIB202, complete genome75.239 %Subject ←→ Query42.2435
NC_015968:4389871Enterobacter asburiae LF7a chromosome, complete genome75.2206 %Subject Query30.7332
NC_008150:1420825*Yersinia pestis Antiqua, complete genome75.1991 %Subject Query37.0184
NC_009778:3454790Enterobacter sakazakii ATCC BAA-894, complete genome75.1961 %Subject Query36.7583
NC_014304:77715Erwinia billingiae Eb661 plasmid pEB102, complete sequence75.193 %Subject Query34.3324
NC_012779:261438*Edwardsiella ictaluri 93-146, complete genome75.1808 %Subject Query37.9045
NC_004547:3817656Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.1654 %Subject Query34.15
NC_014500:3175283Dickeya dadantii 3937 chromosome, complete genome75.1593 %Subject ←→ Query44.4588
NC_012779:3570720*Edwardsiella ictaluri 93-146, complete genome75.1348 %Subject Query34.4297
NC_014562:1935088Pantoea vagans C9-1 chromosome, complete genome75.0643 %Subject Query30.3988
NC_007645:1698803Hahella chejuensis KCTC 2396, complete genome75.0031 %Subject Query36.8434
NC_012880:913698Dickeya dadantii Ech703, complete genome75.0031 %Subject Query30.49