Pre_GI: OUP Neighbours

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Query: NC_009456:998935 Vibrio cholerae O395 chromosome 1, complete sequence

D: 36.0218

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Number of Neighbours: 118




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005140:340000Vibrio vulnificus YJ016 chromosome II, complete sequence77.2273 %Subject ←→ Query26.4713
NC_004347:4211241*Shewanella oneidensis MR-1, complete genome75.1838 %Subject ←→ Query26.7814
NC_015497:3614817Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome77.8309 %Subject ←→ Query26.8361
NC_009052:3229775Shewanella baltica OS155, complete genome77.9167 %Subject ←→ Query27.5596
NC_014334:1848340*Lactobacillus casei str. Zhang chromosome, complete genome77.1936 %Subject ←→ Query27.6265
NC_005140:1820970Vibrio vulnificus YJ016 chromosome II, complete sequence80.288 %Subject ←→ Query27.8788
NC_014966:638355Vibrio vulnificus MO6-24/O chromosome II, complete sequence77.7604 %Subject ←→ Query28.049
NC_010999:2450974*Lactobacillus casei, complete genome76.9148 %Subject ←→ Query28.2344
NC_008577:3485878Shewanella sp. ANA-3 chromosome 1, complete sequence78.2384 %Subject ←→ Query28.3804
NC_017270:1755552*Vibrio cholerae LMA3984-4 chromosome chromosome I, complete79.6385 %Subject ←→ Query28.6114
NC_016901:4039335Shewanella baltica OS678 chromosome, complete genome75.4657 %Subject ←→ Query28.8303
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome75.8793 %Subject ←→ Query28.9383
NC_009997:4091371Shewanella baltica OS195, complete genome75.5484 %Subject ←→ Query29.1038
NC_004460:1618892Vibrio vulnificus CMCP6 chromosome II, complete sequence77.0833 %Subject ←→ Query29.7179
NC_014966:795311Vibrio vulnificus MO6-24/O chromosome II, complete sequence79.4271 %Subject ←→ Query29.8334
NC_008322:722612Shewanella sp. MR-7, complete genome75.6679 %Subject ←→ Query30.0553
NC_004460:973738Vibrio vulnificus CMCP6 chromosome II, complete sequence82.2304 %Subject ←→ Query30.5138
NC_008321:2190000Shewanella sp. MR-4, complete genome75.2727 %Subject ←→ Query30.7271
NC_008321:3232000Shewanella sp. MR-4, complete genome76.0049 %Subject ←→ Query30.7332
NC_016901:414670Shewanella baltica OS678 chromosome, complete genome75.7843 %Subject ←→ Query30.8791
NC_016628:133841*Vibrio furnissii NCTC 11218 chromosome 2, complete sequence75.674 %Subject ←→ Query31.1568
NC_016945:666000Vibrio cholerae IEC224 chromosome II, complete sequence78.8787 %Subject ←→ Query31.171
NC_013198:511795Lactobacillus rhamnosus GG, complete genome76.6513 %Subject ←→ Query31.25
NC_004459:1794540*Vibrio vulnificus CMCP6 chromosome I, complete sequence76.9976 %Subject ←→ Query31.6148
NC_009654:615504*Marinomonas sp. MWYL1, complete genome76.4277 %Subject ←→ Query31.8258
NC_013199:1966334*Lactobacillus rhamnosus Lc 705, complete genome78.079 %Subject ←→ Query31.9404
NC_015581:1043394Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome76.2684 %Subject ←→ Query32.6716
NC_014334:589526Lactobacillus casei str. Zhang chromosome, complete genome75.0276 %Subject ←→ Query32.7578
NC_008577:4183361Shewanella sp. ANA-3 chromosome 1, complete sequence77.9626 %Subject ←→ Query32.7699
NC_002505:2537655*Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.0662 %Subject ←→ Query33.5512
NC_004460:1237129Vibrio vulnificus CMCP6 chromosome II, complete sequence79.2494 %Subject ←→ Query33.7123
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome77.598 %Subject ←→ Query34.0009
NC_015276:2023663Marinomonas mediterranea MMB-1 chromosome, complete genome77.4877 %Subject ←→ Query34.0303
NC_016445:89500Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete81.0202 %Subject ←→ Query34.6333
NC_002505:1550108Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete75.6219 %Subject ←→ Query34.6547
NC_015559:2434000*Marinomonas posidonica IVIA-Po-181 chromosome, complete genome75.8578 %Subject ←→ Query34.7215
NC_000907:1568867Haemophilus influenzae Rd KW20, complete genome77.6471 %Subject ←→ Query34.7841
NC_010554:2646806Proteus mirabilis HI4320, complete genome80.3309 %Subject ←→ Query35.3988
NC_004459:1679335*Vibrio vulnificus CMCP6 chromosome I, complete sequence75.1287 %Subject ←→ Query35.7874
NC_012667:46432*Vibrio cholerae MJ-1236 chromosome 2, complete genome81.0846 %Subject ←→ Query35.9314
NC_009438:2058566Shewanella putrefaciens CN-32 chromosome, complete genome76.9301 %Subject ←→ Query35.972
NC_008321:3964414Shewanella sp. MR-4, complete genome76.3205 %Subject ←→ Query36.1551
NC_012668:160357Vibrio cholerae MJ-1236 chromosome 1, complete sequence78.1955 %Subject ←→ Query36.6506
NC_012580:207025*Vibrio cholerae M66-2 chromosome II, complete sequence83.1373 %Subject ←→ Query36.8634
NC_012583:242760*Vibrio cholerae O395 chromosome chromosome II, complete sequence89.421 %Subject ←→ Query36.9645
NC_016602:2037162*Vibrio furnissii NCTC 11218 chromosome 1, complete sequence75.1593 %Subject ←→ Query37.0927
NC_016602:2292518Vibrio furnissii NCTC 11218 chromosome 1, complete sequence77.8002 %Subject ←→ Query37.1565
NC_016446:979884*Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete83.1066 %Subject ←→ Query37.3254
NC_015572:4916430Methylomonas methanica MC09 chromosome, complete genome76.1887 %Subject ←→ Query37.6362
NC_002506:207097*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete83.1373 %Subject ←→ Query37.898
NC_016945:207089*Vibrio cholerae IEC224 chromosome II, complete sequence83.1403 %Subject ←→ Query38.0893
NC_004349:3938Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence77.1078 %Subject ←→ Query38.1809
NC_002505:168532Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.8566 %Subject ←→ Query38.3098
NC_017162:1228723Acinetobacter baumannii 1656-2 chromosome, complete genome75.7138 %Subject ←→ Query39.8739
NC_016628:537137Vibrio furnissii NCTC 11218 chromosome 2, complete sequence75.5484 %Subject ←→ Query39.9714
NC_015554:4724245*Alteromonas sp. SN2 chromosome, complete genome77.8799 %Subject ←→ Query42.0329
NC_016628:763833Vibrio furnissii NCTC 11218 chromosome 2, complete sequence79.1851 %Subject ←→ Query43.5211
NC_008573:195317Shewanella sp. ANA-3 plasmid 1, complete sequence76.0447 %Subject Query46.5154
NC_010611:240839Acinetobacter baumannii ACICU, complete genome76.8964 %Subject Query48.2217