Query: NC_009438:2058566 Shewanella putrefaciens CN-32 chromosome, complete genome
D: 35.972
Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.
Number of Neighbours: 30
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Subject Host Description |
Compositional Similarity |
Proposed Island Flow | Subject Island D |
---|
NC_015497:3794000 | Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome | 76.3848 % | Subject ←→ Query | 26.2889 |
NC_004347:4211241* | Shewanella oneidensis MR-1, complete genome | 76.1274 % | Subject ←→ Query | 26.7814 |
NC_015497:3614817 | Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome | 76.5686 % | Subject ←→ Query | 26.8361 |
NC_009052:3229775 | Shewanella baltica OS155, complete genome | 76.1274 % | Subject ←→ Query | 27.5596 |
NC_016901:4039335 | Shewanella baltica OS678 chromosome, complete genome | 75.576 % | Subject ←→ Query | 28.8303 |
NC_009997:4091371 | Shewanella baltica OS195, complete genome | 75.6281 % | Subject ←→ Query | 29.1038 |
NC_008321:3232000 | Shewanella sp. MR-4, complete genome | 75.1532 % | Subject ←→ Query | 30.7332 |
NC_008577:2910383* | Shewanella sp. ANA-3 chromosome 1, complete sequence | 75.3248 % | Subject ←→ Query | 31.1953 |
NC_009456:998935* | Vibrio cholerae O395 chromosome 1, complete sequence | 76.9301 % | Subject ←→ Query | 36.0218 |
NC_012580:207025* | Vibrio cholerae M66-2 chromosome II, complete sequence | 75.9681 % | Subject ←→ Query | 36.8634 |
NC_012583:242760* | Vibrio cholerae O395 chromosome chromosome II, complete sequence | 77.6195 % | Subject ←→ Query | 36.9645 |
NC_016446:979884* | Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete | 75.9988 % | Subject ←→ Query | 37.3254 |
NC_002506:207097* | Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete | 75.9681 % | Subject ←→ Query | 37.898 |
NC_016945:207089* | Vibrio cholerae IEC224 chromosome II, complete sequence | 76.0386 % | Subject ←→ Query | 38.0893 |
NC_004349:3938 | Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence | 76.2929 % | Subject ←→ Query | 38.1809 |