Pre_GI: OUP Neighbours

Some Help

Query: NC_009092:2833865 Shewanella loihica PV-4, complete genome

D: 42.5597

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

Number of Neighbours: 16




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009092:521519Shewanella loihica PV-4, complete genome81.9148 %Subject ←→ Query39.1263
NC_009092:1305355Shewanella loihica PV-4, complete genome80 %Subject ←→ Query36.1047
NC_009092:4337617Shewanella loihica PV-4, complete genome79.7335 %Subject ←→ Query37.3591
NC_009092:3682413Shewanella loihica PV-4, complete genome79.6354 %Subject ←→ Query37.8663
NC_009092:1504363Shewanella loihica PV-4, complete genome79.3137 %Subject ←→ Query41.1792
NC_009092:1684467*Shewanella loihica PV-4, complete genome79.2923 %Subject ←→ Query35.4177
NC_009092:4585784*Shewanella loihica PV-4, complete genome78.8787 %Subject ←→ Query43.1063
NC_009092:261778Shewanella loihica PV-4, complete genome78.0331 %Subject ←→ Query44.8134
NC_009092:1874888Shewanella loihica PV-4, complete genome77.3162 %Subject ←→ Query38.333
NC_009092:1935281Shewanella loihica PV-4, complete genome76.8352 %Subject ←→ Query39.682
NC_009092:3239500Shewanella loihica PV-4, complete genome76.4706 %Subject ←→ Query41.7666
NC_009092:1989977Shewanella loihica PV-4, complete genome76.2776 %Subject ←→ Query45.7384
NC_009092:3783000Shewanella loihica PV-4, complete genome76.0631 %Subject ←→ Query37.0598
NC_009092:1047500*Shewanella loihica PV-4, complete genome75.9988 %Subject ←→ Query39.403
NC_009092:3057319*Shewanella loihica PV-4, complete genome75.7353 %Subject ←→ Query42.223
NC_009092:2529518Shewanella loihica PV-4, complete genome75.5545 %Subject ←→ Query41.1003