Pre_GI: OUP Neighbours

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Query: NC_009092:2644164 Shewanella loihica PV-4, complete genome

D: 41.587

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

Number of Neighbours: 23




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009092:2529518Shewanella loihica PV-4, complete genome79.7978 %Subject ←→ Query41.1003
NC_009092:1504363Shewanella loihica PV-4, complete genome79.3903 %Subject ←→ Query41.1792
NC_009092:3057319*Shewanella loihica PV-4, complete genome79.3352 %Subject ←→ Query42.223
NC_009092:261778Shewanella loihica PV-4, complete genome79.2065 %Subject ←→ Query44.8134
NC_009092:3732390Shewanella loihica PV-4, complete genome79.0319 %Subject ←→ Query38.68
NC_009092:521519Shewanella loihica PV-4, complete genome78.9522 %Subject ←→ Query39.1263
NC_009092:1684467*Shewanella loihica PV-4, complete genome78.9277 %Subject ←→ Query35.4177
NC_009092:4337617Shewanella loihica PV-4, complete genome78.3395 %Subject ←→ Query37.3591
NC_009092:3239500Shewanella loihica PV-4, complete genome77.8217 %Subject ←→ Query41.7666
NC_009092:3783000Shewanella loihica PV-4, complete genome77.6103 %Subject ←→ Query37.0598
NC_009092:1305355Shewanella loihica PV-4, complete genome77.4724 %Subject ←→ Query36.1047
NC_009092:1935281Shewanella loihica PV-4, complete genome77.3529 %Subject ←→ Query39.682
NC_009092:1047500*Shewanella loihica PV-4, complete genome76.6513 %Subject ←→ Query39.403
NC_009092:1989977Shewanella loihica PV-4, complete genome76.5441 %Subject ←→ Query45.7384
NC_015424:2316228Aeromonas veronii B565 chromosome, complete genome76.5104 %Subject ←→ Query41.6332
NC_009092:3682413Shewanella loihica PV-4, complete genome76.2439 %Subject ←→ Query37.8663
NC_009348:2034500*Aeromonas salmonicida subsp. salmonicida A449, complete genome75.5668 %Subject ←→ Query40.204
NC_009092:2902171*Shewanella loihica PV-4, complete genome75.337 %Subject ←→ Query45.2649
NC_004347:1038253*Shewanella oneidensis MR-1, complete genome75.2819 %Subject ←→ Query44.6957
NC_009092:2589000Shewanella loihica PV-4, complete genome75.1562 %Subject ←→ Query38.9588
NC_015424:1987964Aeromonas veronii B565 chromosome, complete genome75.1379 %Subject ←→ Query33.6941
NC_009348:1064664*Aeromonas salmonicida subsp. salmonicida A449, complete genome75.0582 %Subject ←→ Query43.1369
NC_015424:2462522Aeromonas veronii B565 chromosome, complete genome75.0092 %Subject Query29.113