Pre_GI: OUP Neighbours

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Query: NC_009092:1989977 Shewanella loihica PV-4, complete genome

D: 45.7384

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

Number of Neighbours: 29




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009092:1047500*Shewanella loihica PV-4, complete genome80.7016 %Subject ←→ Query39.403
NC_009092:1504363Shewanella loihica PV-4, complete genome80.0337 %Subject ←→ Query41.1792
NC_009092:4337617Shewanella loihica PV-4, complete genome78.7561 %Subject ←→ Query37.3591
NC_009092:521519Shewanella loihica PV-4, complete genome78.7255 %Subject ←→ Query39.1263
NC_009092:3682413Shewanella loihica PV-4, complete genome78.5907 %Subject ←→ Query37.8663
NC_008700:2607526Shewanella amazonensis SB2B, complete genome78.3395 %Subject Query34.2914
NC_009092:1684467*Shewanella loihica PV-4, complete genome78.1311 %Subject Query35.4177
NC_009348:1064664*Aeromonas salmonicida subsp. salmonicida A449, complete genome77.8278 %Subject ←→ Query43.1369
NC_009092:1305355Shewanella loihica PV-4, complete genome77.8156 %Subject ←→ Query36.1047
NC_015424:2462522Aeromonas veronii B565 chromosome, complete genome77.644 %Subject Query29.113
NC_009092:261778Shewanella loihica PV-4, complete genome77.2825 %Subject ←→ Query44.8134
NC_008570:2216736*Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome77.0067 %Subject ←→ Query39.7209
NC_009348:4135002Aeromonas salmonicida subsp. salmonicida A449, complete genome76.9301 %Subject ←→ Query42.9608
NC_009092:3057319*Shewanella loihica PV-4, complete genome76.8536 %Subject ←→ Query42.223
NC_008570:1143578Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome76.8444 %Subject ←→ Query46.5676
NC_015424:3520783Aeromonas veronii B565 chromosome, complete genome76.8321 %Subject ←→ Query43.6942
NC_009092:3239500Shewanella loihica PV-4, complete genome76.7126 %Subject ←→ Query41.7666
NC_009092:2644164Shewanella loihica PV-4, complete genome76.5441 %Subject ←→ Query41.587
NC_008700:3927896Shewanella amazonensis SB2B, complete genome76.3327 %Subject Query30.2327
NC_009092:2833865Shewanella loihica PV-4, complete genome76.2776 %Subject ←→ Query42.5597
NC_008570:4594436*Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome75.8885 %Subject ←→ Query51.6501
NC_007947:1229807*Methylobacillus flagellatus KT, complete genome75.7966 %Subject Query30.8508
NC_009092:4585784*Shewanella loihica PV-4, complete genome75.6648 %Subject ←→ Query43.1063
NC_015424:2316228Aeromonas veronii B565 chromosome, complete genome75.6158 %Subject ←→ Query41.6332
NC_009092:1874888Shewanella loihica PV-4, complete genome75.4871 %Subject ←→ Query38.333
NC_009092:2529518Shewanella loihica PV-4, complete genome75.4841 %Subject ←→ Query41.1003
NC_009092:1935281Shewanella loihica PV-4, complete genome75.4473 %Subject ←→ Query39.682
NC_009092:3783000Shewanella loihica PV-4, complete genome75.2941 %Subject ←→ Query37.0598
NC_009348:3029963*Aeromonas salmonicida subsp. salmonicida A449, complete genome75.2451 %Subject ←→ Query44.9985