Pre_GI: OUP Neighbours

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Query: NC_009092:1874888 Shewanella loihica PV-4, complete genome

D: 38.333

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

Number of Neighbours: 18

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009092:1684467*Shewanella loihica PV-4, complete genome77.5153 %Subject ←→ Query35.4177
NC_009092:1305355Shewanella loihica PV-4, complete genome76.3848 %Subject ←→ Query36.1047
NC_009092:3783000Shewanella loihica PV-4, complete genome78.6366 %Subject ←→ Query37.0598
NC_009092:4337617Shewanella loihica PV-4, complete genome77.4112 %Subject ←→ Query37.3591
NC_009092:3682413Shewanella loihica PV-4, complete genome79.9112 %Subject ←→ Query37.8663
NC_009092:2589000Shewanella loihica PV-4, complete genome78.4007 %Subject ←→ Query38.9588
NC_009092:521519Shewanella loihica PV-4, complete genome81.0263 %Subject ←→ Query39.1263
NC_009092:1935281Shewanella loihica PV-4, complete genome76.106 %Subject ←→ Query39.682
NC_009092:2529518Shewanella loihica PV-4, complete genome78.1219 %Subject ←→ Query41.1003
NC_009092:1504363Shewanella loihica PV-4, complete genome79.1054 %Subject ←→ Query41.1792
NC_009092:3239500Shewanella loihica PV-4, complete genome78.4743 %Subject ←→ Query41.7666
NC_009092:3057319*Shewanella loihica PV-4, complete genome78.0147 %Subject ←→ Query42.223
NC_009092:2282437*Shewanella loihica PV-4, complete genome75.576 %Subject ←→ Query42.2302
NC_009092:2833865Shewanella loihica PV-4, complete genome77.3162 %Subject ←→ Query42.5597
NC_009092:4585784*Shewanella loihica PV-4, complete genome78.1863 %Subject ←→ Query43.1063
NC_009092:261778Shewanella loihica PV-4, complete genome76.2132 %Subject ←→ Query44.8134
NC_009092:2902171*Shewanella loihica PV-4, complete genome78.992 %Subject ←→ Query45.2649
NC_009092:1989977Shewanella loihica PV-4, complete genome75.4871 %Subject ←→ Query45.7384