Pre_GI: OUP Neighbours

Some Help

Query: NC_009092:1504363 Shewanella loihica PV-4, complete genome

D: 41.1792

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

Number of Neighbours: 24




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010334:722408Shewanella halifaxensis HAW-EB4, complete genome75.1501 %Subject ←→ Query32.0363
NC_009092:1684467*Shewanella loihica PV-4, complete genome82.7298 %Subject ←→ Query35.4177
NC_009092:1305355Shewanella loihica PV-4, complete genome77.9841 %Subject ←→ Query36.1047
NC_009092:3783000Shewanella loihica PV-4, complete genome78.9614 %Subject ←→ Query37.0598
NC_009092:4337617Shewanella loihica PV-4, complete genome80.5974 %Subject ←→ Query37.3591
NC_009092:3682413Shewanella loihica PV-4, complete genome78.8817 %Subject ←→ Query37.8663
NC_009092:1874888Shewanella loihica PV-4, complete genome79.1054 %Subject ←→ Query38.333
NC_009092:2589000Shewanella loihica PV-4, complete genome81.6299 %Subject ←→ Query38.9588
NC_009092:521519Shewanella loihica PV-4, complete genome80.242 %Subject ←→ Query39.1263
NC_009092:1047500*Shewanella loihica PV-4, complete genome76.4706 %Subject ←→ Query39.403
NC_009092:1935281Shewanella loihica PV-4, complete genome82.5153 %Subject ←→ Query39.682
NC_009092:2529518Shewanella loihica PV-4, complete genome80.3217 %Subject ←→ Query41.1003
NC_009092:2644164Shewanella loihica PV-4, complete genome79.3903 %Subject ←→ Query41.587
NC_009092:3239500Shewanella loihica PV-4, complete genome79.2463 %Subject ←→ Query41.7666
NC_009092:3057319*Shewanella loihica PV-4, complete genome77.0466 %Subject ←→ Query42.223
NC_009092:2282437*Shewanella loihica PV-4, complete genome77.7145 %Subject ←→ Query42.2302
NC_009092:1441813Shewanella loihica PV-4, complete genome75.9528 %Subject ←→ Query42.2476
NC_009092:1127000Shewanella loihica PV-4, complete genome75.4963 %Subject ←→ Query42.3087
NC_009092:2833865Shewanella loihica PV-4, complete genome79.3137 %Subject ←→ Query42.5597
NC_009092:4585784*Shewanella loihica PV-4, complete genome80.5453 %Subject ←→ Query43.1063
NC_009092:261778Shewanella loihica PV-4, complete genome80.2022 %Subject ←→ Query44.8134
NC_009092:2902171*Shewanella loihica PV-4, complete genome82.356 %Subject ←→ Query45.2649
NC_009092:1263964*Shewanella loihica PV-4, complete genome81.2623 %Subject ←→ Query45.4018
NC_009092:1989977Shewanella loihica PV-4, complete genome80.0337 %Subject ←→ Query45.7384