Pre_GI: OUP Neighbours

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Query: NC_009092:1441813 Shewanella loihica PV-4, complete genome

D: 42.2476

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

Number of Neighbours: 15

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005071:1064000*Prochlorococcus marinus str. MIT 9313, complete genome75.1409 %Subject Query29.1069
NC_008321:458811Shewanella sp. MR-4, complete genome75.9406 %Subject Query31.5836
NC_009654:4716417Marinomonas sp. MWYL1, complete genome75.1471 %Subject ←→ Query32.6103
NC_005071:671084*Prochlorococcus marinus str. MIT 9313, complete genome76.0325 %Subject ←→ Query33.0978
NC_008820:2268900Prochlorococcus marinus str. MIT 9303, complete genome75.5392 %Subject ←→ Query33.6181
NC_014733:1857020Methylovorus sp. MP688 chromosome, complete genome75.1838 %Subject ←→ Query34.8096
NC_010554:2646806Proteus mirabilis HI4320, complete genome79.8407 %Subject ←→ Query35.3988
NC_008700:1115436*Shewanella amazonensis SB2B, complete genome75.5392 %Subject ←→ Query36.6166
NC_002506:207097*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete75.7108 %Subject ←→ Query37.898
NC_002505:168532Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete78.3824 %Subject ←→ Query38.3098
NC_008820:2595500*Prochlorococcus marinus str. MIT 9303, complete genome75.8333 %Subject ←→ Query38.6403
NC_008820:211616*Prochlorococcus marinus str. MIT 9303, complete genome75.288 %Subject ←→ Query38.7027
NC_005071:172364Prochlorococcus marinus str. MIT 9313, complete genome76.011 %Subject ←→ Query39.0173
NC_008319:635157*Synechococcus sp. CC9311, complete genome75.1011 %Subject ←→ Query40.552
NC_009092:1504363Shewanella loihica PV-4, complete genome75.9528 %Subject ←→ Query41.1792