Pre_GI: OUP Neighbours

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Query: NC_009092:1263964 Shewanella loihica PV-4, complete genome

D: 45.4018

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

Number of Neighbours: 6




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009831:1255995*Shewanella sediminis HAW-EB3, complete genome76.2439 %Subject Query35.3903
NC_009092:1684467*Shewanella loihica PV-4, complete genome75.4136 %Subject ←→ Query35.4177
NC_009092:2589000Shewanella loihica PV-4, complete genome76.5319 %Subject ←→ Query38.9588
NC_009092:1935281Shewanella loihica PV-4, complete genome77.644 %Subject ←→ Query39.682
NC_009092:1504363Shewanella loihica PV-4, complete genome81.2623 %Subject ←→ Query41.1792
NC_009092:2902171*Shewanella loihica PV-4, complete genome76.0447 %Subject ←→ Query45.2649