Pre_GI: OUP Neighbours

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Query: NC_009092:1127000 Shewanella loihica PV-4, complete genome

D: 42.3087

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

Number of Neighbours: 12




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005071:1064000*Prochlorococcus marinus str. MIT 9313, complete genome75.0888 %Subject Query29.1069
NC_013422:991500*Halothiobacillus neapolitanus c2, complete genome75.6771 %Subject Query30.9399
NC_009925:647752Acaryochloris marina MBIC11017, complete genome75.6526 %Subject Query31.7181
NC_008576:3307297*Magnetococcus sp. MC-1, complete genome75.8609 %Subject ←→ Query32.4052
NC_005071:671084*Prochlorococcus marinus str. MIT 9313, complete genome76.7402 %Subject ←→ Query33.0978
NC_008820:2268900Prochlorococcus marinus str. MIT 9303, complete genome77.4234 %Subject ←→ Query33.6181
NC_012969:2476318*Methylovorus glucosetrophus SIP3-4 chromosome, complete genome75.1226 %Subject ←→ Query34.3356
NC_008576:2458573*Magnetococcus sp. MC-1, complete genome75.5545 %Subject ←→ Query39.1415
NC_008570:2216736*Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome75.5392 %Subject ←→ Query39.7209
NC_009092:1504363Shewanella loihica PV-4, complete genome75.4963 %Subject ←→ Query41.1792
NC_008319:171847*Synechococcus sp. CC9311, complete genome77.5368 %Subject ←→ Query46.3349
NC_015424:1689500Aeromonas veronii B565 chromosome, complete genome75.2849 %Subject Query53.0358