Pre_GI: OUP Neighbours

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Query: NC_009092:1047500 Shewanella loihica PV-4, complete genome

D: 39.403

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

Number of Neighbours: 16




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_009092:1684467*Shewanella loihica PV-4, complete genome77.0803 %Subject ←→ Query35.4177
NC_009092:1305355Shewanella loihica PV-4, complete genome77.886 %Subject ←→ Query36.1047
NC_009092:3783000Shewanella loihica PV-4, complete genome75.6832 %Subject ←→ Query37.0598
NC_009092:4337617Shewanella loihica PV-4, complete genome77.9013 %Subject ←→ Query37.3591
NC_009092:3682413Shewanella loihica PV-4, complete genome76.7494 %Subject ←→ Query37.8663
NC_009092:521519Shewanella loihica PV-4, complete genome78.0545 %Subject ←→ Query39.1263
NC_009092:2529518Shewanella loihica PV-4, complete genome75.9344 %Subject ←→ Query41.1003
NC_009092:1504363Shewanella loihica PV-4, complete genome76.4706 %Subject ←→ Query41.1792
NC_009092:2644164Shewanella loihica PV-4, complete genome76.6513 %Subject ←→ Query41.587
NC_009092:3239500Shewanella loihica PV-4, complete genome76.0784 %Subject ←→ Query41.7666
NC_009092:3057319*Shewanella loihica PV-4, complete genome79.9571 %Subject ←→ Query42.223
NC_009092:2833865Shewanella loihica PV-4, complete genome75.9988 %Subject ←→ Query42.5597
NC_009092:4585784*Shewanella loihica PV-4, complete genome75.5699 %Subject ←→ Query43.1063
NC_009348:1064664*Aeromonas salmonicida subsp. salmonicida A449, complete genome75.4657 %Subject ←→ Query43.1369
NC_009092:261778Shewanella loihica PV-4, complete genome75.8824 %Subject ←→ Query44.8134
NC_009092:1989977Shewanella loihica PV-4, complete genome80.7016 %Subject ←→ Query45.7384