Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_009092:3057319 Shewanella loihica PV-4, complete genome

D: 42.223

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_016745:2785346*Oceanimonas sp. GK1 chromosome, complete genomeSubject → Query27.6143
NC_009348:1347500*Aeromonas salmonicida subsp. salmonicida A449, complete genomeSubject → Query28.277
NC_008700:3514745Shewanella amazonensis SB2B, complete genomeSubject → Query28.733
NC_018868:3943088Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeSubject → Query29.0096
NC_015424:2462522Aeromonas veronii B565 chromosome, complete genomeSubject → Query29.113
NC_009350:6987Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeSubject → Query30.186
NC_008700:3927896Shewanella amazonensis SB2B, complete genomeSubject → Query30.2327
NC_018868:973379*Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeSubject → Query30.8829
NC_009348:47974Aeromonas salmonicida subsp. salmonicida A449, complete genomeSubject → Query31.8318
NC_008700:3692333Shewanella amazonensis SB2B, complete genomeSubject → Query32.155
NC_016745:2913712Oceanimonas sp. GK1 chromosome, complete genomeSubject ←→ Query32.8656
NC_016745:1892500Oceanimonas sp. GK1 chromosome, complete genomeSubject ←→ Query33.0751
NC_015424:1987964Aeromonas veronii B565 chromosome, complete genomeSubject ←→ Query33.6941
NC_008700:2607526Shewanella amazonensis SB2B, complete genomeSubject ←→ Query34.2914
NC_008700:367949*Shewanella amazonensis SB2B, complete genomeSubject ←→ Query34.4431
NC_016745:2028424*Oceanimonas sp. GK1 chromosome, complete genomeSubject ←→ Query34.7805
NC_018868:282738*Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeSubject ←→ Query34.9713
NC_009831:1255995*Shewanella sediminis HAW-EB3, complete genomeSubject ←→ Query35.3903
NC_009092:1684467*Shewanella loihica PV-4, complete genomeSubject ←→ Query35.4177
NC_009092:1305355Shewanella loihica PV-4, complete genomeSubject ←→ Query36.1047
NC_009092:3783000Shewanella loihica PV-4, complete genomeSubject ←→ Query37.0598
NC_009092:4337617Shewanella loihica PV-4, complete genomeSubject ←→ Query37.3591
NC_009092:3682413Shewanella loihica PV-4, complete genomeSubject ←→ Query37.8663
NC_008700:2788363Shewanella amazonensis SB2B, complete genomeSubject ←→ Query38.0753
NC_009092:1874888Shewanella loihica PV-4, complete genomeSubject ←→ Query38.333
NC_009092:3732390Shewanella loihica PV-4, complete genomeSubject ←→ Query38.68
NC_009092:2589000Shewanella loihica PV-4, complete genomeSubject ←→ Query38.9588
NC_009092:521519Shewanella loihica PV-4, complete genomeSubject ←→ Query39.1263
NC_009092:1047500*Shewanella loihica PV-4, complete genomeSubject ←→ Query39.403
NC_018868:2867500Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeSubject ←→ Query39.5337
NC_009350:137645Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeSubject ←→ Query39.5423
NC_009092:1935281Shewanella loihica PV-4, complete genomeSubject ←→ Query39.682
NC_009348:2034500*Aeromonas salmonicida subsp. salmonicida A449, complete genomeSubject ←→ Query40.204
NC_009092:2529518Shewanella loihica PV-4, complete genomeSubject ←→ Query41.1003
NC_009092:1504363Shewanella loihica PV-4, complete genomeSubject ←→ Query41.1792
NC_009092:2644164Shewanella loihica PV-4, complete genomeSubject ←→ Query41.587
NC_015424:2316228Aeromonas veronii B565 chromosome, complete genomeSubject ←→ Query41.6332
NC_009092:3239500Shewanella loihica PV-4, complete genomeSubject ←→ Query41.7666
NC_009092:3057319*Shewanella loihica PV-4, complete genomeSubject ←→ Query42.223
NC_009092:2282437*Shewanella loihica PV-4, complete genomeSubject ←→ Query42.2302
NC_009092:2833865Shewanella loihica PV-4, complete genomeSubject ←→ Query42.5597
NC_009348:4135002Aeromonas salmonicida subsp. salmonicida A449, complete genomeSubject ←→ Query42.9608
NC_009092:4585784*Shewanella loihica PV-4, complete genomeSubject ←→ Query43.1063
NC_009348:1064664*Aeromonas salmonicida subsp. salmonicida A449, complete genomeSubject ←→ Query43.1369
NC_004347:1038253*Shewanella oneidensis MR-1, complete genomeSubject ←→ Query44.6957
NC_009092:261778Shewanella loihica PV-4, complete genomeSubject ←→ Query44.8134
NC_009348:3029963*Aeromonas salmonicida subsp. salmonicida A449, complete genomeSubject ←→ Query44.9985
NC_009092:2902171*Shewanella loihica PV-4, complete genomeSubject ←→ Query45.2649
NC_009092:1263964*Shewanella loihica PV-4, complete genomeSubject ←→ Query45.4018
NC_009092:1989977Shewanella loihica PV-4, complete genomeSubject ←→ Query45.7384
NC_008570:1143578Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeSubject ←→ Query46.5676