Pre_GI: OUP Neighbours

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Query: NC_009012:1663357 Clostridium thermocellum ATCC 27405, complete genome

D: 29.2515

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

Number of Neighbours: 30

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013517:1529765Sebaldella termitidis ATCC 33386, complete genome77.739 %Subject ←→ Query22.7626
NC_013517:2815482Sebaldella termitidis ATCC 33386, complete genome79.5987 %Subject ←→ Query23.0183
NC_013517:1055854*Sebaldella termitidis ATCC 33386, complete genome80.0643 %Subject ←→ Query24.8121
NC_007503:1486000Carboxydothermus hydrogenoformans Z-2901, complete genome75.0337 %Subject ←→ Query25.2756
NC_013517:1014000Sebaldella termitidis ATCC 33386, complete genome79.3199 %Subject ←→ Query26.6756
NC_009012:1Clostridium thermocellum ATCC 27405, complete genome87.8493 %Subject ←→ Query27.6125
NS_000191:120700*Uncultured Termite group 1 bacterium phylotype Rs-D17, complete76.8076 %Subject ←→ Query28.2201
NC_014376:460687Clostridium saccharolyticum WM1 chromosome, complete genome75.3462 %Subject ←→ Query29.4139
NC_013895:188225*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.5362 %Subject ←→ Query30.3016
NC_013895:1429023*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete76.0876 %Subject ←→ Query31.3351
NC_009012:3617293Clostridium thermocellum ATCC 27405, complete genome75.3401 %Subject ←→ Query31.4953
NC_012781:302387*Eubacterium rectale ATCC 33656, complete genome77.5214 %Subject ←→ Query31.6513
NC_012781:3315614Eubacterium rectale ATCC 33656, complete genome75.8395 %Subject ←→ Query31.8893
NC_009012:75000*Clostridium thermocellum ATCC 27405, complete genome82.1477 %Subject ←→ Query32.8915
NC_015520:2821406Mahella australiensis 50-1 BON chromosome, complete genome79.2279 %Subject ←→ Query32.9861
NC_015520:2567329Mahella australiensis 50-1 BON chromosome, complete genome75.7843 %Subject ←→ Query33.3587
NC_009012:2806000*Clostridium thermocellum ATCC 27405, complete genome79.3413 %Subject ←→ Query33.4083
NC_015520:55710*Mahella australiensis 50-1 BON chromosome, complete genome75.1195 %Subject ←→ Query33.5687
NC_012781:2148478*Eubacterium rectale ATCC 33656, complete genome79.5159 %Subject ←→ Query33.5846
NC_015520:3060495Mahella australiensis 50-1 BON chromosome, complete genome76.3174 %Subject ←→ Query34.2391
NC_015160:1467445*Odoribacter splanchnicus DSM 20712 chromosome, complete genome75.4351 %Subject ←→ Query34.9147
NC_012781:4065*Eubacterium rectale ATCC 33656, complete genome76.829 %Subject ←→ Query34.9939
NC_015520:2612767Mahella australiensis 50-1 BON chromosome, complete genome77.6042 %Subject ←→ Query35.4815
NC_012781:751757*Eubacterium rectale ATCC 33656, complete genome77.788 %Subject ←→ Query36.7643
NC_015977:3324000*Roseburia hominis A2-183 chromosome, complete genome76.152 %Subject ←→ Query37.2295
NC_008023:1070986*Streptococcus pyogenes MGAS2096, complete genome76.1826 %Subject ←→ Query39.0651
NC_015977:189101Roseburia hominis A2-183 chromosome, complete genome77.9933 %Subject Query40.9219
NC_015977:3011177Roseburia hominis A2-183 chromosome, complete genome77.0741 %Subject Query44.0829
NC_015977:935798*Roseburia hominis A2-183 chromosome, complete genome77.0741 %Subject Query44.2207
NC_015977:2807782*Roseburia hominis A2-183 chromosome, complete genome78.655 %Subject Query44.7042