Pre_GI: OUP Neighbours

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Query: NC_009012:1 Clostridium thermocellum ATCC 27405, complete genome

D: 27.6125

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

Number of Neighbours: 18

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013517:1529765Sebaldella termitidis ATCC 33386, complete genome78.2047 %Subject ←→ Query22.7626
NC_013517:2815482Sebaldella termitidis ATCC 33386, complete genome78.5202 %Subject ←→ Query23.0183
NC_013517:1055854*Sebaldella termitidis ATCC 33386, complete genome79.8866 %Subject ←→ Query24.8121
NC_007503:1486000Carboxydothermus hydrogenoformans Z-2901, complete genome78.5386 %Subject ←→ Query25.2756
NC_013517:1014000Sebaldella termitidis ATCC 33386, complete genome79.4608 %Subject ←→ Query26.6756
NC_009012:1663357Clostridium thermocellum ATCC 27405, complete genome87.8493 %Subject ←→ Query29.2515
NC_015520:595532*Mahella australiensis 50-1 BON chromosome, complete genome76.2071 %Subject ←→ Query31.4658
NC_009012:3617293Clostridium thermocellum ATCC 27405, complete genome77.3621 %Subject ←→ Query31.4953
NC_012781:302387*Eubacterium rectale ATCC 33656, complete genome75.7322 %Subject ←→ Query31.6513
NC_009012:75000*Clostridium thermocellum ATCC 27405, complete genome77.0987 %Subject ←→ Query32.8915
NC_015520:2821406Mahella australiensis 50-1 BON chromosome, complete genome78.4988 %Subject ←→ Query32.9861
NC_012781:2148478*Eubacterium rectale ATCC 33656, complete genome77.8922 %Subject ←→ Query33.5846
NC_015520:3060495Mahella australiensis 50-1 BON chromosome, complete genome76.4216 %Subject ←→ Query34.2391
NC_015520:2612767Mahella australiensis 50-1 BON chromosome, complete genome75.3002 %Subject ←→ Query35.4815
NC_012781:751757*Eubacterium rectale ATCC 33656, complete genome76.8444 %Subject ←→ Query36.7643
NC_015277:2568781Sphingobacterium sp. 21 chromosome, complete genome75.6863 %Subject Query41.0445
NC_015977:2807782*Roseburia hominis A2-183 chromosome, complete genome75.0337 %Subject Query44.7042
NC_015311:145215Prevotella denticola F0289 chromosome, complete genome75.144 %Subject Query45.3829