Pre_GI: OUP Neighbours

Some Help

Query: NC_008526:2489196 Lactobacillus casei ATCC 334, complete genome

D: 36.8865

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

Number of Neighbours: 9




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013199:2536705*Lactobacillus rhamnosus Lc 705, complete genome85.5545 %Subject ←→ Query37.5527
NC_013199:282901*Lactobacillus rhamnosus Lc 705, complete genome77.4877 %Subject ←→ Query34.5452
NC_013198:298000*Lactobacillus rhamnosus GG, complete genome77.4265 %Subject ←→ Query33.8795
NC_013198:1921500*Lactobacillus rhamnosus GG, complete genome76.0846 %Subject ←→ Query33.277
NC_013198:813830*Lactobacillus rhamnosus GG, complete genome75.8088 %Subject ←→ Query37.9547
NC_013199:1886271*Lactobacillus rhamnosus Lc 705, complete genome75.72 %Subject ←→ Query35.0179
NC_013199:811929*Lactobacillus rhamnosus Lc 705, complete genome75.6985 %Subject ←→ Query39.2072
NC_008526:817628*Lactobacillus casei ATCC 334, complete genome75.242 %Subject ←→ Query36.4528
NC_015975:267994*Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.1103 %Subject ←→ Query36.1625