Query: NC_008526:1822000 Lactobacillus casei ATCC 334, complete genome
D: 35.8686
Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.
Number of Neighbours: 26
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Subject Host Description |
Compositional Similarity |
Proposed Island Flow | Subject Island D |
---|
NC_010999:1979989* | Lactobacillus casei, complete genome | 91.7678 % | Subject ←→ Query | 36.6636 |
NC_014334:1775781* | Lactobacillus casei str. Zhang chromosome, complete genome | 91.3756 % | Subject ←→ Query | 36.9239 |
NC_014334:267409* | Lactobacillus casei str. Zhang chromosome, complete genome | 84.9632 % | Subject ←→ Query | 35.3356 |
NC_010999:252605 | Lactobacillus casei, complete genome | 84.1728 % | Subject ←→ Query | 32.847 |
NC_008526:250000* | Lactobacillus casei ATCC 334, complete genome | 83.7898 % | Subject ←→ Query | 35.0097 |
NC_014334:769205* | Lactobacillus casei str. Zhang chromosome, complete genome | 82.3192 % | Subject ←→ Query | 39.1896 |
NC_008526:74500* | Lactobacillus casei ATCC 334, complete genome | 80.337 % | Subject ←→ Query | 28.9383 |
NC_014334:1848340* | Lactobacillus casei str. Zhang chromosome, complete genome | 79.7304 % | Subject ←→ Query | 27.6265 |
NC_014334:99000* | Lactobacillus casei str. Zhang chromosome, complete genome | 79.6078 % | Subject ←→ Query | 29.7551 |
NC_010999:2516000 | Lactobacillus casei, complete genome | 79.5159 % | Subject ←→ Query | 27.1158 |
NC_010554:2646806 | Proteus mirabilis HI4320, complete genome | 79.4516 % | Subject ←→ Query | 35.3988 |
NC_013199:1966334* | Lactobacillus rhamnosus Lc 705, complete genome | 79.0748 % | Subject ←→ Query | 31.9404 |
NC_010999:2450974* | Lactobacillus casei, complete genome | 78.9553 % | Subject ←→ Query | 28.2344 |
NC_014334:589526 | Lactobacillus casei str. Zhang chromosome, complete genome | 78.4467 % | Subject ←→ Query | 32.7578 |
NC_015572:1 | Methylomonas methanica MC09 chromosome, complete genome | 77.2917 % | Subject ←→ Query | 34.0009 |
NC_015567:1660462 | Serratia sp. AS9 chromosome, complete genome | 76.3113 % | Subject ←→ Query | 42.6158 |
NC_015566:1659288 | Serratia sp. AS12 chromosome, complete genome | 76.1857 % | Subject ←→ Query | 44.7005 |
CU928145:2655989* | Escherichia coli 55989 chromosome, complete genome | 75.8578 % | Subject ←→ Query | 34.5105 |
NC_011748:2655989* | Escherichia coli 55989, complete genome | 75.8578 % | Subject ←→ Query | 34.5105 |
NC_010611:240839 | Acinetobacter baumannii ACICU, complete genome | 75.7996 % | Subject ← Query | 48.2217 |
NC_008573:195317 | Shewanella sp. ANA-3 plasmid 1, complete sequence | 75.7659 % | Subject ← Query | 46.5154 |
NC_015572:4916430 | Methylomonas methanica MC09 chromosome, complete genome | 75.6311 % | Subject ←→ Query | 37.6362 |
NC_015222:1749553* | Nitrosomonas sp. AL212 chromosome, complete genome | 75.5515 % | Subject ←→ Query | 27.7237 |
NC_013198:511795 | Lactobacillus rhamnosus GG, complete genome | 75.3707 % | Subject ←→ Query | 31.25 |
NC_008577:4183361 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 75.144 % | Subject ←→ Query | 32.7699 |
NC_015731:169989 | Nitrosomonas sp. Is79A3 chromosome, complete genome | 75.0245 % | Subject ←→ Query | 27.6873 |