Pre_GI: OUP Neighbours

Some Help

Query: NC_008526:1822000 Lactobacillus casei ATCC 334, complete genome

D: 35.8686

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

Number of Neighbours: 26




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010999:2516000Lactobacillus casei, complete genome79.5159 %Subject ←→ Query27.1158
NC_014334:1848340*Lactobacillus casei str. Zhang chromosome, complete genome79.7304 %Subject ←→ Query27.6265
NC_015731:169989Nitrosomonas sp. Is79A3 chromosome, complete genome75.0245 %Subject ←→ Query27.6873
NC_015222:1749553*Nitrosomonas sp. AL212 chromosome, complete genome75.5515 %Subject ←→ Query27.7237
NC_010999:2450974*Lactobacillus casei, complete genome78.9553 %Subject ←→ Query28.2344
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome80.337 %Subject ←→ Query28.9383
NC_014334:99000*Lactobacillus casei str. Zhang chromosome, complete genome79.6078 %Subject ←→ Query29.7551
NC_013198:511795Lactobacillus rhamnosus GG, complete genome75.3707 %Subject ←→ Query31.25
NC_013199:1966334*Lactobacillus rhamnosus Lc 705, complete genome79.0748 %Subject ←→ Query31.9404
NC_014334:589526Lactobacillus casei str. Zhang chromosome, complete genome78.4467 %Subject ←→ Query32.7578
NC_008577:4183361Shewanella sp. ANA-3 chromosome 1, complete sequence75.144 %Subject ←→ Query32.7699
NC_010999:252605Lactobacillus casei, complete genome84.1728 %Subject ←→ Query32.847
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome77.2917 %Subject ←→ Query34.0009
CU928145:2655989*Escherichia coli 55989 chromosome, complete genome75.8578 %Subject ←→ Query34.5105
NC_011748:2655989*Escherichia coli 55989, complete genome75.8578 %Subject ←→ Query34.5105
NC_008526:250000*Lactobacillus casei ATCC 334, complete genome83.7898 %Subject ←→ Query35.0097
NC_014334:267409*Lactobacillus casei str. Zhang chromosome, complete genome84.9632 %Subject ←→ Query35.3356
NC_010554:2646806Proteus mirabilis HI4320, complete genome79.4516 %Subject ←→ Query35.3988
NC_010999:1979989*Lactobacillus casei, complete genome91.7678 %Subject ←→ Query36.6636
NC_014334:1775781*Lactobacillus casei str. Zhang chromosome, complete genome91.3756 %Subject ←→ Query36.9239
NC_015572:4916430Methylomonas methanica MC09 chromosome, complete genome75.6311 %Subject ←→ Query37.6362
NC_014334:769205*Lactobacillus casei str. Zhang chromosome, complete genome82.3192 %Subject ←→ Query39.1896
NC_015567:1660462Serratia sp. AS9 chromosome, complete genome76.3113 %Subject ←→ Query42.6158
NC_015566:1659288Serratia sp. AS12 chromosome, complete genome76.1857 %Subject ←→ Query44.7005
NC_008573:195317Shewanella sp. ANA-3 plasmid 1, complete sequence75.7659 %Subject Query46.5154
NC_010611:240839Acinetobacter baumannii ACICU, complete genome75.7996 %Subject Query48.2217