Pre_GI: OUP Neighbours

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Query: NC_008343:2050000 Granulibacter bethesdensis CGDNIH1, complete genome

D: 33.0435

Host Lineage: Granulibacter bethesdensis; Granulibacter; Acetobacteraceae; Rhodospirillales; Proteobacteria; Bacteria

General Information: Isolated from a patient with fever and lymphadenitis. Chronic granulomatous disease (CGD) is a rare inherited disease of the phagocyte NADPH oxidase system causing defective production of toxic oxygen metabolites, impaired bacterial and fungal killing, and recurrent life-threatening infections. This species was isolated from a 39 year old man with CGD and was shown to be the causal agent of the disease by classical methods. The isolation of this organism is the first known case of a bacterium from the Acetobacteraceae family to be the cause of an invasive human disease.

Number of Neighbours: 57

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014216:2027017Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome75.5423 %Subject ←→ Query24.8115
NC_008209:1385094*Roseobacter denitrificans OCh 114, complete genome75.0368 %Subject ←→ Query25.2163
NC_006677:1596560*Gluconobacter oxydans 621H, complete genome78.3977 %Subject ←→ Query25.474
NC_008358:2574343Hyphomonas neptunium ATCC 15444, complete genome76.8413 %Subject ←→ Query25.9598
NC_010645:73573Bordetella avium 197N, complete genome76.3235 %Subject ←→ Query26.1274
NC_007614:2517226Nitrosospira multiformis ATCC 25196 chromosome 1, complete77.3989 %Subject ←→ Query27.0586
NC_007298:1721425Dechloromonas aromatica RCB, complete genome75.1501 %Subject ←→ Query27.1109
NC_008209:253663Roseobacter denitrificans OCh 114, complete genome75.1348 %Subject ←→ Query27.4501
NC_011206:2040000Acidithiobacillus ferrooxidans ATCC 53993, complete genome75.8241 %Subject ←→ Query28.0156
NC_007947:577315*Methylobacillus flagellatus KT, complete genome75.3033 %Subject ←→ Query28.9164
NC_008343:823093*Granulibacter bethesdensis CGDNIH1, complete genome83.2506 %Subject ←→ Query28.9691
NC_011206:2239109Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.6851 %Subject ←→ Query29.043
NC_016027:2580477Gluconacetobacter xylinus NBRC 3288, complete genome80.095 %Subject ←→ Query29.2161
NC_008343:88184*Granulibacter bethesdensis CGDNIH1, complete genome80.7874 %Subject ←→ Query29.651
NC_011206:1293880Acidithiobacillus ferrooxidans ATCC 53993, complete genome79.856 %Subject ←→ Query30.2438
NC_011206:2549132Acidithiobacillus ferrooxidans ATCC 53993, complete genome79.0288 %Subject ←→ Query30.4333
NC_006677:2402282*Gluconobacter oxydans 621H, complete genome80.5729 %Subject ←→ Query30.6703
NC_011206:123791Acidithiobacillus ferrooxidans ATCC 53993, complete genome75.7292 %Subject ←→ Query30.9901
NC_012880:3241886*Dickeya dadantii Ech703, complete genome75.1869 %Subject ←→ Query31.3412
NC_015942:2943127Acidithiobacillus ferrivorans SS3 chromosome, complete genome76.4216 %Subject ←→ Query31.3442
NC_010740:1051000*Brucella abortus S19 chromosome 2, complete sequence75.1562 %Subject ←→ Query31.6153
NC_014972:2503107Desulfobulbus propionicus DSM 2032 chromosome, complete genome76.8321 %Subject ←→ Query32.3164
NC_013592:1602242Dickeya dadantii Ech586, complete genome75.0153 %Subject ←→ Query32.4112
NC_007624:1046500*Brucella melitensis biovar Abortus 2308 chromosome II, complete75.1287 %Subject ←→ Query32.7278
NC_008343:61191*Granulibacter bethesdensis CGDNIH1, complete genome83.4099 %Subject ←→ Query32.7943
NC_012559:1497548Laribacter hongkongensis HLHK9, complete genome77.3836 %Subject ←→ Query32.8388
NC_012969:142000*Methylovorus glucosetrophus SIP3-4 chromosome, complete genome75.3217 %Subject ←→ Query33.0551
NC_008358:798390Hyphomonas neptunium ATCC 15444, complete genome75.2145 %Subject ←→ Query33.231
NC_015942:403296Acidithiobacillus ferrivorans SS3 chromosome, complete genome76.1029 %Subject ←→ Query33.4124
NC_012880:135508Dickeya dadantii Ech703, complete genome76.4675 %Subject ←→ Query33.437
NC_011206:2447905Acidithiobacillus ferrooxidans ATCC 53993, complete genome75.6556 %Subject ←→ Query33.5046
NC_007498:3085511*Pelobacter carbinolicus DSM 2380, complete genome75.049 %Subject ←→ Query33.6029
NC_008740:3520500*Marinobacter aquaeolei VT8, complete genome75.8058 %Subject ←→ Query33.8076
NC_013209:2582878*Acetobacter pasteurianus IFO 3283-01, complete genome80.0398 %Subject ←→ Query33.9094
NC_008343:2389710Granulibacter bethesdensis CGDNIH1, complete genome83.9583 %Subject ←→ Query34.0079
NC_011206:200000Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.3879 %Subject ←→ Query34.1713
NC_013173:1259898Desulfomicrobium baculatum DSM 4028, complete genome75.5821 %Subject ←→ Query34.2124
NC_015942:722980Acidithiobacillus ferrivorans SS3 chromosome, complete genome79.424 %Subject ←→ Query34.2899
NC_004757:905417Nitrosomonas europaea ATCC 19718, complete genome76.3848 %Subject ←→ Query34.6191
NC_011206:1233985Acidithiobacillus ferrooxidans ATCC 53993, complete genome75.674 %Subject ←→ Query34.8359
NC_008343:1470360*Granulibacter bethesdensis CGDNIH1, complete genome81.6268 %Subject ←→ Query35.2576
NC_008740:2563278Marinobacter aquaeolei VT8, complete genome76.2592 %Subject ←→ Query35.2973
NC_008343:1699132Granulibacter bethesdensis CGDNIH1, complete genome80.8517 %Subject ←→ Query35.3703
NC_016027:123853Gluconacetobacter xylinus NBRC 3288, complete genome82.3407 %Subject ←→ Query36.2025
NC_007498:1072112Pelobacter carbinolicus DSM 2380, complete genome75.288 %Subject ←→ Query36.33
NC_013173:1231213Desulfomicrobium baculatum DSM 4028, complete genome76.5196 %Subject ←→ Query38.4372
NC_005085:2014987Chromobacterium violaceum ATCC 12472, complete genome75.8272 %Subject ←→ Query39.4063
NC_016048:2678205*Oscillibacter valericigenes Sjm18-20, complete genome75.0582 %Subject ←→ Query39.5991
NC_015942:355944Acidithiobacillus ferrivorans SS3 chromosome, complete genome76.7004 %Subject ←→ Query39.8005
NC_007626:2354260Magnetospirillum magneticum AMB-1, complete genome75.3248 %Subject ←→ Query39.8874
NC_016027:2047954*Gluconacetobacter xylinus NBRC 3288, complete genome81.5656 %Subject ←→ Query41.3036
NC_016027:1902854Gluconacetobacter xylinus NBRC 3288, complete genome80.2328 %Subject ←→ Query41.8559
NC_008343:1743500Granulibacter bethesdensis CGDNIH1, complete genome79.8897 %Subject ←→ Query41.9398
NC_013173:3854368*Desulfomicrobium baculatum DSM 4028, complete genome75.3768 %Subject ←→ Query42.4531
NC_007498:357484Pelobacter carbinolicus DSM 2380, complete genome75.6832 %Subject Query43.1192
NC_015851:89006Acidithiobacillus caldus SM-1 megaplasmid, complete sequence77.8523 %Subject Query43.2117
NC_012559:1064821Laribacter hongkongensis HLHK9, complete genome78.5172 %Subject Query45.2624