Pre_GI: OUP Neighbours

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Query: NC_008343:1743500 Granulibacter bethesdensis CGDNIH1, complete genome

D: 41.9398

Host Lineage: Granulibacter bethesdensis; Granulibacter; Acetobacteraceae; Rhodospirillales; Proteobacteria; Bacteria

General Information: Isolated from a patient with fever and lymphadenitis. Chronic granulomatous disease (CGD) is a rare inherited disease of the phagocyte NADPH oxidase system causing defective production of toxic oxygen metabolites, impaired bacterial and fungal killing, and recurrent life-threatening infections. This species was isolated from a 39 year old man with CGD and was shown to be the causal agent of the disease by classical methods. The isolation of this organism is the first known case of a bacterium from the Acetobacteraceae family to be the cause of an invasive human disease.

Number of Neighbours: 69

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_006677:1596560*Gluconobacter oxydans 621H, complete genome76.6146 %Subject Query25.474
NC_006672:47610Gluconobacter oxydans 621H plasmid pGOX1, complete sequence77.307 %Subject Query25.6475
NC_008343:2589680*Granulibacter bethesdensis CGDNIH1, complete genome76.7831 %Subject Query27.6248
NC_012559:1888000Laribacter hongkongensis HLHK9, complete genome75.0153 %Subject Query28.1693
NC_005085:2774370Chromobacterium violaceum ATCC 12472, complete genome76.1489 %Subject Query28.4919
NC_008343:823093*Granulibacter bethesdensis CGDNIH1, complete genome80.5178 %Subject Query28.9691
NC_011206:2239109Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.1029 %Subject Query29.043
NC_016027:2580477Gluconacetobacter xylinus NBRC 3288, complete genome75.3401 %Subject Query29.2161
NC_008343:88184*Granulibacter bethesdensis CGDNIH1, complete genome79.6048 %Subject Query29.651
NC_016027:1776300Gluconacetobacter xylinus NBRC 3288, complete genome76.8352 %Subject Query29.7483
NC_011206:1293880Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.2653 %Subject Query30.2438
NC_004310:937800*Brucella suis 1330 chromosome I, complete sequence75.1961 %Subject Query30.3549
NC_011206:2549132Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.6268 %Subject Query30.4333
NC_010103:936250*Brucella canis ATCC 23365 chromosome I, complete sequence75.2727 %Subject Query30.4849
NC_014841:131308Pantoea sp. At-9b plasmid pPAT9B04, complete sequence76.011 %Subject Query30.5022
NC_010694:1324250Erwinia tasmaniensis, complete genome75.2972 %Subject Query30.6177
NC_006677:2402282*Gluconobacter oxydans 621H, complete genome77.5705 %Subject Query30.6703
NC_011206:863987Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.7463 %Subject Query30.8885
NC_006932:956805*Brucella abortus biovar 1 str. 9-941 chromosome I, complete75.0551 %Subject Query31.0233
NC_012880:3241886*Dickeya dadantii Ech703, complete genome75.1256 %Subject Query31.3412
NC_015942:2943127Acidithiobacillus ferrivorans SS3 chromosome, complete genome75.6066 %Subject Query31.3442
NC_010169:957565*Brucella suis ATCC 23445 chromosome I, complete sequence75.1348 %Subject Query31.4304
NC_007618:955000*Brucella melitensis biovar Abortus 2308 chromosome I, complete75.2114 %Subject Query31.48
NC_003317:190975*Brucella melitensis 16M chromosome I, complete sequence75.337 %Subject Query31.8918
NC_010742:955104*Brucella abortus S19 chromosome 1, complete sequence75.0551 %Subject ←→ Query32.1853
NC_008343:61191*Granulibacter bethesdensis CGDNIH1, complete genome82.9075 %Subject ←→ Query32.7943
NC_012559:1497548Laribacter hongkongensis HLHK9, complete genome77.2733 %Subject ←→ Query32.8388
NC_008343:2050000Granulibacter bethesdensis CGDNIH1, complete genome79.8897 %Subject ←→ Query33.0435
NC_009648:1956070Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.2439 %Subject ←→ Query33.077
NC_012880:135508Dickeya dadantii Ech703, complete genome77.9259 %Subject ←→ Query33.437
NC_015942:3185193Acidithiobacillus ferrivorans SS3 chromosome, complete genome75.9069 %Subject ←→ Query33.4574
NC_003317:1030220*Brucella melitensis 16M chromosome I, complete sequence75.2451 %Subject ←→ Query33.5007
NC_011206:2447905Acidithiobacillus ferrooxidans ATCC 53993, complete genome75.3799 %Subject ←→ Query33.5046
NC_015942:668775Acidithiobacillus ferrivorans SS3 chromosome, complete genome78.4436 %Subject ←→ Query33.564
NC_013209:2582878*Acetobacter pasteurianus IFO 3283-01, complete genome79.2494 %Subject ←→ Query33.9094
NC_014562:1772842*Pantoea vagans C9-1 chromosome, complete genome75.6066 %Subject ←→ Query33.916
NC_008343:2389710Granulibacter bethesdensis CGDNIH1, complete genome81.8811 %Subject ←→ Query34.0079
NC_013173:1259898Desulfomicrobium baculatum DSM 4028, complete genome75.2083 %Subject ←→ Query34.2124
NC_014500:2589089*Dickeya dadantii 3937 chromosome, complete genome75.3952 %Subject ←→ Query34.2818
NC_015942:722980Acidithiobacillus ferrivorans SS3 chromosome, complete genome75.8456 %Subject ←→ Query34.2899
NC_011206:1264639Acidithiobacillus ferrooxidans ATCC 53993, complete genome76.2102 %Subject ←→ Query34.3755
NC_013209:867500*Acetobacter pasteurianus IFO 3283-01, complete genome76.7739 %Subject ←→ Query34.7615
NC_010103:1920585*Brucella canis ATCC 23365 chromosome I, complete sequence75.6587 %Subject ←→ Query34.9718
NC_009648:1914621Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.9332 %Subject ←→ Query35.2022
NC_008343:1470360*Granulibacter bethesdensis CGDNIH1, complete genome82.1293 %Subject ←→ Query35.2576
NC_008343:1699132Granulibacter bethesdensis CGDNIH1, complete genome81.7524 %Subject ←→ Query35.3703
NC_015942:787808Acidithiobacillus ferrivorans SS3 chromosome, complete genome75.5484 %Subject ←→ Query35.6214
NC_014121:3188928Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete75.3033 %Subject ←→ Query35.6396
NC_010169:1739402*Brucella suis ATCC 23445 chromosome I, complete sequence75.1532 %Subject ←→ Query35.9669
NC_016027:123853Gluconacetobacter xylinus NBRC 3288, complete genome79.4118 %Subject ←→ Query36.2025
NC_014121:1682638Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete75.0797 %Subject ←→ Query36.6963
NC_015942:1167785Acidithiobacillus ferrivorans SS3 chromosome, complete genome75.0827 %Subject ←→ Query38.0276
NC_006932:1939145*Brucella abortus biovar 1 str. 9-941 chromosome I, complete75.0705 %Subject ←→ Query38.1696
NC_006677:435652*Gluconobacter oxydans 621H, complete genome76.2255 %Subject ←→ Query38.2232
NC_003317:48375*Brucella melitensis 16M chromosome I, complete sequence76.4093 %Subject ←→ Query39.0321
NC_016048:2678205*Oscillibacter valericigenes Sjm18-20, complete genome76.008 %Subject ←→ Query39.5991
NC_013282:2026083Cronobacter turicensis, complete genome75.7996 %Subject ←→ Query40.0241
NC_013850:2846069Klebsiella variicola At-22 chromosome, complete genome76.2929 %Subject ←→ Query40.1759
NC_016026:2170500Micavibrio aeruginosavorus ARL-13 chromosome, complete genome75.337 %Subject ←→ Query41.2078
NC_016027:2047954*Gluconacetobacter xylinus NBRC 3288, complete genome81.2224 %Subject ←→ Query41.3036
NC_013850:2624899Klebsiella variicola At-22 chromosome, complete genome76.9026 %Subject ←→ Query41.5295
NC_013850:3303500Klebsiella variicola At-22 chromosome, complete genome76.7708 %Subject ←→ Query42.6013
NC_007498:357484Pelobacter carbinolicus DSM 2380, complete genome76.5656 %Subject ←→ Query43.1192
NC_015851:89006Acidithiobacillus caldus SM-1 megaplasmid, complete sequence75.0827 %Subject ←→ Query43.2117
NC_009778:4188000Enterobacter sakazakii ATCC BAA-894, complete genome77.7788 %Subject ←→ Query43.3593
NC_009648:2252757Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome75.3156 %Subject ←→ Query45.1304
NC_012559:1064821Laribacter hongkongensis HLHK9, complete genome75.9804 %Subject ←→ Query45.2624
NC_013173:1712138*Desulfomicrobium baculatum DSM 4028, complete genome75.7751 %Subject ←→ Query46.9406
NC_008609:3732192*Pelobacter propionicus DSM 2379, complete genome76.7463 %Subject Query54.0876